RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 ITGBL1O95965 494 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FGF1P05230 155 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 GALTP07902 379 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 LTA4HP09960 611 aaKnown RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 TSHRP16473 764 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 STX5Q13190 355 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 MSS51Q4VC12 460 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FBXO48Q5FWF7 155 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 CES5AQ6NT32 575 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 TMC5Q6UXY8 1006 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 OR4L1Q8NH43 312 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 TSEN34Q9BSV6 310 aaKnown RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 THUMPD3Q9BV44 507 aaKnown RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 CCDC167Q9P0B6 97 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 YIPF1Q9Y548 306 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 RAI2Q9Y5P3 530 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 CEP290O15078 2479 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 A0A1B0GVM2 712 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 TCAF2A6NFQ2 919 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FAM72CH0Y354 149 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 CD3EAPO15446 510 aaKnown RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 THRAP10827 490 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 HLA-DPA1P20036 260 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 SLC10A7Q0GE19 358 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 CCDC15Q0P6D6 951 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 USP4Q13107 963 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FLOT2Q14254 428 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FAM72AQ5TYM5 149 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FAM72DQ6L9T8 149 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 MFSD5Q6N075 450 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 SCIMPQ6UWF3 145 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 FAM72BQ86X60 149 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 TRAPPC5Q8IUR0 188 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 DENND6AQ8IWF6 608 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 SYTL1Q8IYJ3 562 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 GALNT4Q8N4A0 578 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 PTGR2Q8N8N7 351 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-207ENST00000504761 NAT8LQ8N9F0 302 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 CCDC138Q96M89 665 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 RUBCNLQ9H714 662 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 EFCAB1Q9HAE3 211 aa14.21□□□□□ -0.13
TCOF1-207ENST00000504761 ARHGAP10A1A4S6 786 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 TMEM247A6NEH6 219 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 SLC9A3R1O14745 358 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-207ENST00000504761 TBC1D4O60343 1298 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 MLNP12872 115 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 CALB2P22676 271 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 GRIA4P48058 902 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 CDK7P50613 346 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 CCNG1P51959 295 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 CREMQ03060 361 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.142e-7■■□□□ 13.8
TCOF1-207ENST00000504761 CYLC2Q14093 348 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-207ENST00000504761 DEFB107AQ8IZN7 70 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 NTAN1Q96AB6 310 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 HTATIP2Q9BUP3 242 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 TMEM51Q9NW97 253 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 VWA7Q9Y334 891 aa14.21□□□□□ -0.14
TCOF1-207ENST00000504761 URB1O60287 2271 aaKnown RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 MTMR11A4FU01 709 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 C2orf71A6NGG8 1288 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 H2AFYO75367 372 aaKnown RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 MC4RP32245 332 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 DLG2Q15700 870 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 GPSM1Q86YR5 675 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 ARNTL2Q8WYA1 636 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 ELOVL6Q9H5J4 265 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 PDZK1P1A8MUH7 402 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 ZMPSTE24O75844 475 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 HNRNPH1P31943 449 aaKnown RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 WASP42768 502 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 HNRNPDQ14103 355 aaKnown RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 SLC25A51Q9H1U9 297 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 CD248Q9HCU0 757 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 TAGLN3Q9UI15 199 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 PACSIN3Q9UKS6 424 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 HS3ST4Q9Y661 456 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 J3KR12 359 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 IL10P22301 178 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 GABRB2P47870 512 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 MLLT6P55198 1093 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 GRM3Q14832 879 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 RCN1Q15293 331 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 STXBP5Q5T5C0 1151 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 ATXN7L2Q5T6C5 722 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 SETD3Q86TU7 594 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-207ENST00000504761 TRPC4APQ8TEL6 797 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 FAR2Q96K12 515 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 MYOCQ99972 504 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 RHOJQ9H4E5 214 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 GJD2Q9UKL4 321 aa14.2□□□□□ -0.14
TCOF1-207ENST00000504761 LRRC74AQ0VAA2 488 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 GPR17Q13304 367 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 GET4Q7L5D6 327 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-207ENST00000504761 TLR6Q9Y2C9 796 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 CARNS1A5YM72 827 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 CNTN5O94779 1100 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms