RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FBXO8Q9NRD0 319 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.43■■□□□ 1.02
SDF4-206ENST00000478938 FKBP14Q9NWM8 211 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 VWA7Q9Y334 891 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 PTPRJQ12913 1337 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 IL7RP16871 459 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 TNNI1P19237 187 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ABCG1P45844 678 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ALDH7A1P49419 539 aaKnown RBP21.42■■□□□ 1.02
SDF4-206ENST00000478938 NFE2Q16621 373 aaPredicted RBP21.42■■□□□ 1.02
SDF4-206ENST00000478938 R3HCC1LQ7Z5L2 792 aaKnown RBP21.42■■□□□ 1.02
SDF4-206ENST00000478938 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.42■■□□□ 1.021e-7■■■■■ 42.1
SDF4-206ENST00000478938 CENPNQ96H22 339 aaPredicted RBP21.42■■□□□ 1.02
SDF4-206ENST00000478938 ZNF560Q96MR9 790 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 DACH2Q96NX9 599 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 TMEM246Q9BRR3 403 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ZBBXA8MT70 800 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 KPNA7A9QM74 516 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 RNF103O00237 685 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 VNN1O95497 513 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ENPP1P22413 925 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 USP37Q86T82 979 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ADCK1Q86TW2 530 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 GATAD2AQ86YP4 633 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ZNF280CQ8ND82 737 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 HDAC10Q969S8 669 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 LRRC40Q9H9A6 602 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ITM2CQ9NQX7 267 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 EGFL7Q9UHF1 273 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ZNF221Q9UK13 617 aa21.42■■□□□ 1.02
SDF4-206ENST00000478938 ITGB4P16144 1822 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 GSTM2P28161 218 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CRKLP46109 303 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 SNRPFP62306 86 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 HIST2H2ACQ16777 129 aaPredicted RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 PUS10Q3MIT2 529 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 SAMD4BQ5PRF9 694 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 ATAD3CQ5T2N8 411 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CCDC103Q8IW40 242 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 TMEM35BQ8NCS4 154 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 BTN2A3PQ96KV6 586 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 VPS35Q96QK1 796 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 ING2Q9H160 280 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 RPAP3Q9H6T3 665 aaPredicted RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 RUBCNLQ9H714 662 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CAB39LQ9H9S4 337 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CHRAC1Q9NRG0 131 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 PLSCR3Q9NRY6 295 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CCDC167Q9P0B6 97 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 BAG5Q9UL15 447 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 SMCHD1A6NHR9 2005 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 H0Y858 1186 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 M0R3G1 203 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 HSPA1AP0DMV8 641 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 HSPA1BP0DMV9 641 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 MIPP30301 263 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 EIF2DP41214 584 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 GRIA4P48058 902 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 RARRES1P49788 294 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CACNB3P54284 484 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 ADARB1P78563 741 aaKnown RBP21.41■■□□□ 1.02
SDF4-206ENST00000478938 FAM102BQ5T8I3 360 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 AGMOQ6ZNB7 445 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 DCLK2Q8N568 766 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 WDTC1Q8N5D0 677 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 MCUQ8NE86 351 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 CITED4Q96RK1 184 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 TMEM181Q9P2C4 612 aa21.41■■□□□ 1.02
SDF4-206ENST00000478938 INMTO95050 263 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 FKBP9O95302 570 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 KRT6AP02538 564 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 KRT6BP04259 564 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 ASNSP08243 561 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 HTR1AP08908 422 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 CDK10Q15131 360 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 SPATC1Q76KD6 591 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 CATSPER4Q7RTX7 472 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 CADM2Q8N3J6 435 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 OR7A2PQ8NGA2 310 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 CDKL2Q92772 493 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 DEPDC7Q96QD5 511 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 NUDT5Q9UKK9 219 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 TBX1O43435 398 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 ERVK-10P10266 1014 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 ARNTP27540 789 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 MAGEA6P43360 314 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 CDH6P55285 790 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 CCNA1P78396 465 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 TAP1Q03518 808 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 BST2Q10589 180 aaKnown RBP21.4■■□□□ 1.02
SDF4-206ENST00000478938 DPY19L1Q2PZI1 675 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 ADPRMQ3LIE5 342 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 AGKQ53H12 422 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 ZBTB41Q5SVQ8 909 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 SLFN13Q68D06 897 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 GPAT2Q6NUI2 795 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 GLRX5Q86SX6 157 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 TMEM161BQ8NDZ6 487 aa21.4■■□□□ 1.02
SDF4-206ENST00000478938 RPL10LQ96L21 214 aaKnown RBP21.4■■□□□ 1.02
SDF4-206ENST00000478938 TBC1D13Q9NVG8 400 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms