RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 VPS72Q15906 364 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 KLHL32Q96NJ5 620 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 OSER1Q9NX31 292 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CCDC162PA2VCL2 907 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 AVILO75366 819 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GIT2Q14161 759 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FBXO25Q8TCJ0 367 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SEPT4O43236 478 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC28A2O43868 658 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CALCAP01258 141 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 USP46P62068 366 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MC1RQ01726 317 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TAS1R3Q7RTX0 852 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 AMIGO1Q86WK6 493 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SPATA6LQ8N4H0 392 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF606Q8WXB4 792 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FEM1CQ96JP0 617 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 LMAN2LQ9H0V9 348 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GIMD1P0DJR0 217 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CRABP2P29373 138 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GALNT3Q14435 633 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CPT1CQ8TCG5 803 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TCP10LQ8TDR4 215 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 GANQ9H2C0 597 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ATP13A3Q9H7F0 1226 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ARL5AQ9Y689 179 aa13.34□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 MAGEB16A2A368 324 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 E5RJQ4 531 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SLC9A3R1O14745 358 aaPredicted RBP13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ZNF806P0C7X5 589 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CNTFP26441 200 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 SEC13P55735 322 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ERVK-9P63128 1117 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 ERVK-24P63145 666 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FAM98AQ8NCA5 519 aaKnown RBP13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 OR6Y1Q8NGX8 325 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 TLE6Q9H808 572 aa13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 FBXO6Q9NRD1 293 aaPredicted RBP13.33□□□□□ -0.27
NPHP3-ACAD11-201ENST00000471702 CASZ1Q86V15 1759 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SHROOM2Q13796 1616 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SH3D21A4FU49 640 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC35G4P0C7Q5 338 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RAB27AP51159 221 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CARTPTQ16568 116 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GFOD2Q3B7J2 385 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PYDC2Q56P42 97 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CLVS1Q8IUQ0 354 aaPredicted RBP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NETO2Q8NC67 525 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CDRT15Q96T59 188 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CNOT6Q9ULM6 557 aaKnown RBP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 A0A075B6Q4 140 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC26A2P50443 739 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PSME3P61289 254 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HIPK1Q86Z02 1210 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SVOPQ8N4V2 548 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 F8VZ95 297 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PEX11AO75192 247 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DGKAP23743 735 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GALK1P51570 392 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HECTD3Q5T447 861 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FAM91A1Q658Y4 838 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DEF8Q6ZN54 512 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF483Q8TF39 744 aaPredicted RBP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 EEF1AKMT1Q8WVE0 214 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 C5orf34Q96MH7 638 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MDC1Q14676 2089 aaKnown RBP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 URADA6NGE7 173 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ATP9AO75110 1047 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MCRS1Q96EZ8 462 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MTFR1LQ9H019 292 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TPRKBQ9Y3C4 175 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ELFN1P0C7U0 828 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PGM5Q15124 567 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HYIQ5T013 277 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OFCC1Q8IZS5 231 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR10H3O60404 316 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 AKAP3O75969 853 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PIK3CGP48736 1102 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NEK3P51956 506 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ITGA1P56199 1179 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms