RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 LAYNQ6UX15 382 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 NPNTQ6UXI9 565 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 SERPINA13PQ6UXR4 307 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 SND1Q7KZF4 910 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF3-203ENST00000467514 GRK7Q8WTQ7 553 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 WBP2Q969T9 261 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
PRPF3-203ENST00000467514 TKTL2Q9H0I9 626 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 NEUROG2Q9H2A3 272 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 WDCPQ9H6R7 721 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 CD248Q9HCU0 757 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 OLA1Q9NTK5 396 aaKnown RBP11.23□□□□□ -0.61
PRPF3-203ENST00000467514 ETNK2Q9NVF9 386 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 COX16Q9P0S2 106 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 SFMBT1Q9UHJ3 866 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
PRPF3-203ENST00000467514 UTP11Q9Y3A2 253 aaKnown RBP11.23□□□□□ -0.61
PRPF3-203ENST00000467514 H0Y8X5 98 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 SEC31AO94979 1220 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 LDOC1O95751 146 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 TBX18O95935 607 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 GAS8O95995 478 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 FAM153BP0C7A2 387 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 CDK4P11802 303 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 AMPD1P23109 780 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 CCR1P32246 355 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 ACTN2P35609 894 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 ATP5C1P36542 298 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 GRIA4P48058 902 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 NR2C2P49116 596 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 KCNC4Q03721 635 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 SLC10A2Q12908 348 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 TARDBPQ13148 414 aaKnown RBP eCLIP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 PTPRNQ16849 979 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 ARL13BQ3SXY8 428 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 FAM153CQ494X1 144 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 HES3Q5TGS1 186 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 EMBQ6PCB8 327 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 KLHDC10Q6PID8 442 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 RFX8Q6ZV50 586 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 HTR3DQ70Z44 454 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 GSPT2Q8IYD1 628 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 GLIS1Q8NBF1 620 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 KNL1Q8NG31 2342 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 GANCQ8TET4 914 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 CAVIN3Q969G5 261 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 SKA1Q96BD8 255 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 HAUS1Q96CS2 278 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 RTP4Q96DX8 246 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 OLFM3Q96PB7 478 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 MAK16Q9BXY0 300 aaKnown RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 FUT8Q9BYC5 575 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 ACE2Q9BYF1 805 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 FAM129AQ9BZQ8 928 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 PCED1AQ9H1Q7 454 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
PRPF3-203ENST00000467514 USP29Q9HBJ7 922 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 TM9SF3Q9HD45 589 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 ARFGAP3Q9NP61 516 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 MARK1Q9P0L2 795 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 FAM153AQ9UHL3 310 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 DNMT3LQ9UJW3 386 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 NUDT5Q9UKK9 219 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 PTPRQQ9UMZ3 2332 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 SNX10Q9Y5X0 201 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 MYO18BQ8IUG5 2567 aa11.22□□□□□ -0.61
PRPF3-203ENST00000467514 KNTC1P50748 2209 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 MYLKQ15746 1914 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 PYCARD-AS1I3L0S3 204 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 ERVH48-1M5A8F1 160 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 EEF2KO00418 725 aaKnown RBP11.21□□□□□ -0.61
PRPF3-203ENST00000467514 MAP2K7O14733 419 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 PCDHGA12O60330 932 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 DFNA5O60443 496 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 PAGE1O75459 146 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 CYBBP04839 570 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 RBP3P10745 1247 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 SLC2A3P11169 496 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 HTR7P34969 479 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 ARL4AP40617 200 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 TBX4P57082 545 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 EIF3EP60228 445 aaKnown RBP11.21□□□□□ -0.61
PRPF3-203ENST00000467514 GBE1Q04446 702 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 DNAJC3Q13217 504 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 XRCC4Q13426 336 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 ZNF234Q14588 700 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 MAP9Q49MG5 647 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 FNDC3BQ53EP0 1204 aaKnown RBP11.21□□□□□ -0.61
PRPF3-203ENST00000467514 C10orf120Q5SQS8 335 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 TMCO3Q6UWJ1 677 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 DBX2Q6ZNG2 339 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 GATAD2AQ86YP4 633 aa11.21□□□□□ -0.61
PRPF3-203ENST00000467514 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms