RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SEC24AO95486 1093 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 ANP32DO95626 131 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 EZRP15311 586 aaKnown RBP16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 STMN1P16949 149 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 PRAMEP78395 509 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 DLG1Q12959 904 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 HNRNPDQ14103 355 aaKnown RBP16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 KPNB1Q14974 876 aaKnown RBP16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 KDELC1Q6UW63 502 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 LINGO4Q6UY18 593 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 CENPLQ8N0S6 344 aaPredicted RBP16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 IFT43Q96FT9 208 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 C1orf74Q96LT6 269 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 THTPAQ9BU02 230 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 MYLKQ15746 1914 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 TTC36A6NLP5 189 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 TMEM233B4DJY2 109 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 GSC2O15499 205 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 PSMD3O43242 534 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 CALB2P22676 271 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 MAGEA11P43364 429 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 GRIA4P48058 902 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 SCNN1BP51168 640 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 CSE1LP55060 971 aaKnown RBP16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 SLC9B1Q4ZJI4 515 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 SIRPB2Q5JXA9 342 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 SNX30Q5VWJ9 437 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 ETAA1Q9NY74 926 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 MARCH4Q9P2E8 410 aaPredicted RBP16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 PACSIN3Q9UKS6 424 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 ACOT9Q9Y305 439 aa16.97■□□□□ 0.31
LAPTM4B-201ENST00000445593 C2orf78A6NCI8 922 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 CBX4O00257 560 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 MMP2P08253 660 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 ARSAP15289 507 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 TSPAN8P19075 237 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 PGM1P36871 562 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 IDH3AP50213 366 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 SLC25A3Q00325 362 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 LBRQ14739 615 aaKnown RBP16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 CCDC153Q494R4 210 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 NXNQ6DKJ4 435 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 ANKS3Q6ZW76 656 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 PIM3Q86V86 326 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 TDRD5Q8NAT2 981 aaKnown RBP16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 OR13C4Q8NGS5 318 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 WDR60Q8WVS4 1066 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 IMP4Q96G21 291 aaKnown RBP16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 TBATAQ96M53 351 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 VN1R3Q9BXE9 311 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 COG4Q9H9E3 785 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 ATP11BQ9Y2G3 1177 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 DCXO43602 365 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 CACNG3O60359 315 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 MPOP05164 745 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 CD151P48509 253 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 CDK7P50613 346 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 TLE2Q04725 743 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 PDCD2Q16342 344 aaPredicted RBP16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 MFSD4BQ5TF39 518 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 AFMIDQ63HM1 303 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 POTEHQ6S545 545 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 NUF2Q9BZD4 464 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 CLIC5Q9NZA1 410 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 FRMPD3Q5JV73 1810 aa16.96■□□□□ 0.31
LAPTM4B-201ENST00000445593 TRIM13O60858 407 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 PAMP19021 973 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 PAX3P23760 479 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 EPHA3P29320 983 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 SLC8A1P32418 973 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 ATP5C1P36542 298 aaKnown RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 KHDC1Q4VXA5 237 aaKnown RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 PHTF2Q8N3S3 785 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 NAT14Q8WUY8 206 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 SPDL1Q96EA4 605 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 PHF21BQ96EK2 531 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 OLFM1Q99784 485 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 SPATS2LQ9NUQ6 558 aaKnown RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 PIGNO95427 931 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 HNRNPLP14866 589 aaKnown RBP eCLIP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 RGRP47804 291 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 NDST2P52849 883 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 RAB10P61026 200 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 ITFG2Q969R8 447 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCDC124Q96CT7 223 aaKnown RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 UNC80Q8N2C7 3258 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 GOLGA8CPA6NN73 597 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 COCHO43405 550 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 MT-CO1P00395 513 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 SBK3P0C264 359 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 INSCQ1MX18 579 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 ARL13AQ5H913 290 aaPredicted RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZNF483Q8TF39 744 aaPredicted RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 HEXDCQ8WVB3 486 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 DNAJC1Q96KC8 554 aaKnown RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 OR52B2Q96RD2 323 aa16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 TSR3Q9UJK0 312 aaKnown RBP16.95■□□□□ 0.3
LAPTM4B-201ENST00000445593 SPECC1L-ADORA2AF8WAN1 911 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 SIN3BO75182 1162 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms