RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 C19orf48Q6RUI8 117 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 ARHGAP36Q6ZRI8 547 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 ABI3BPQ7Z7G0 1075 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 CAMK1DQ8IU85 385 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 TP53INP2Q8IXH6 220 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 CXorf40AQ8TE69 158 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 HSPH1Q92598 858 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 RAB7BQ96AH8 199 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 LRIG1Q96JA1 1093 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 OSBPL1AQ9BXW6 950 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 LRRC19Q9H756 370 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 CWC15Q9P013 229 aaKnown RBP11.74□□□□□ -0.53
LINC00963-201ENST00000412141 IFNKQ9P0W0 207 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 COQ6Q9Y2Z9 468 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 HS3ST3A1Q9Y663 406 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 PTPRBP23467 1997 aa11.74□□□□□ -0.53
LINC00963-201ENST00000412141 ITPR1Q14643 2758 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 LOC400499M0QZD8 3231 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 TTC24A2A3L6 582 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 BUB1BO60566 1050 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 PRAMEF11O60813 436 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 PALMO75781 387 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 PIAS2O75928 621 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 CKMT2P17540 419 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 IL1R2P27930 398 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 RGRP47804 291 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 NDST2P52849 883 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 TARDBPQ13148 414 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 FZD2Q14332 565 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 CFAP58Q5T655 872 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 HES3Q5TGS1 186 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 HGSNATQ68CP4 663 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 CYP4V2Q6ZWL3 525 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 PROSER1Q86XN7 944 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 NPWQ8N729 165 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 TSEN2Q8NCE0 465 aaKnown RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 NBEAQ8NFP9 2946 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 CASKIN2Q8WXE0 1202 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 TSC1Q92574 1164 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 KLF6Q99612 283 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 EDEM3Q9BZQ6 932 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 THAP2Q9H0W7 228 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 SP110Q9HB58 689 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 MBNL1Q9NR56 388 aaKnown RBP11.73□□□□□ -0.53
LINC00963-201ENST00000412141 RAXQ9Y2V3 346 aa11.73□□□□□ -0.53
LINC00963-201ENST00000412141 CHD5Q8TDI0 1954 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 CXorf51AA0A1B0GTR3 108 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 A8MX80 341 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 AREL1O15033 823 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 TM7SF2O76062 418 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 CAPNS1P04632 268 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 AMPD1P23109 780 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 GJC1P36383 396 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 RABIFP47224 123 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 THOP1P52888 689 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 ZNF211Q13398 564 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 C1orf61Q13536 156 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 PROX2Q3B8N5 592 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 CCDC122Q5T0U0 273 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 TXNRD3NBQ6F5E7 133 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 SRLQ86TD4 932 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 TMPRSS12Q86WS5 348 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 ARHGAP12Q8IWW6 846 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 LMX1AQ8TE12 382 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 CINPQ9BW66 212 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 ISCUQ9H1K1 167 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 TCEAL2Q9H3H9 227 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 SUV39H2Q9H5I1 410 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 PDFQ9HBH1 243 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 MRPL47Q9HD33 250 aaKnown RBP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 PCDH12Q9NPG4 1184 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 ETNK2Q9NVF9 386 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 KLF15Q9UIH9 416 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 LUC7L2Q9Y383 392 aaKnown RBP11.72□□□□□ -0.53
LINC00963-201ENST00000412141 PCDHGA1Q9Y5H4 931 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 AK5Q9Y6K8 562 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 ASXL3Q9C0F0 2248 aa11.72□□□□□ -0.53
LINC00963-201ENST00000412141 A0A087X0T9 212 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 SPTY2D1-AS1A0A0U1RR47 76 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 H3BRJ5 948 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 SCAMP1O15126 338 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 SERPING1P05155 500 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 C1SP09871 688 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 FAM228BP0C875 321 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 MYBL1P10243 752 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 JUNDP17535 347 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 HTR7P34969 479 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 HNF1BP35680 557 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 IGFALSP35858 605 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 PBX1P40424 430 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 SCNN1BP51168 640 aa11.71□□□□□ -0.53
LINC00963-201ENST00000412141 HNRNPKP61978 463 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00963-201ENST00000412141 ZBED6P86452 979 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms