RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LACTBL1A8MY62 500 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 BTBD19C9JJ37 291 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 DLX3O60479 287 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 HMGCS2P54868 508 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 RABL3Q5HYI8 236 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 LYSMD3Q7Z3D4 306 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 OR7A2PQ8NGA2 310 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 MUS81Q96NY9 551 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 KCTD14Q9BQ13 255 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 NEURL2Q9BR09 285 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 REXO4Q9GZR2 422 aaKnown RBP16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 ALG9Q9H6U8 611 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 SPON1Q9HCB6 807 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 PNPLA8Q9NP80 782 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 CACNA2D2Q9NY47 1150 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 MATN1P21941 496 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 SLC7A1P30825 629 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 ASPAP45381 313 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 KCNJ8Q15842 424 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 SLC22A16Q86VW1 577 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 SFRP1Q8N474 314 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 TBCDQ9BTW9 1192 aa16.05■□□□□ 0.16
PRPF40B-201ENST00000261897 ERI2A8K979 691 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 CLDN25C9JDP6 229 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 AP1G1O43747 822 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 CHEK2O96017 543 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 MMP10P09238 476 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 ALDH1B1P30837 517 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 IQSEC1Q6DN90 963 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 ZNF567Q8N184 647 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 NIPA2Q8N8Q9 360 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 OR10Q1Q8NGQ4 319 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 BIRC8Q96P09 236 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 SLC25A23Q9BV35 468 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 LTB4R2Q9NPC1 389 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 AASSQ9UDR5 926 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 IRS2Q9Y4H2 1338 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 FAM95CA0A1B0GW59 222 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 KANSL1LA0AUZ9 987 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TBX1O43435 398 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 PRDX6P30041 224 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 RPS9P46781 194 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 LIMK2P53671 638 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 IST1P53990 364 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TPI1P60174 286 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 NIPAL1Q6NVV3 410 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 OR52K2Q8NGK3 314 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 NSMCE3Q96MG7 304 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TMEM74Q96NL1 305 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TBCBQ99426 244 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 OXSMQ9NWU1 459 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 SUN2Q9UH99 717 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 IL1BP01584 269 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 LINC00032P0C843 101 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 OXTRP30559 389 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 MAPRE1Q15691 268 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TIGD2Q4W5G0 525 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TREML2Q5T2D2 321 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 ANKRD26P1Q6NSI1 321 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 HM13Q8TCT9 377 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 FIG4Q92562 907 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 CITED4Q96RK1 184 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 KCTD15Q96SI1 283 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 NPLQ9BXD5 320 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 ROGDIQ9GZN7 287 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 PORCNQ9H237 461 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 MOCS1Q9NZB8 636 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 TBC1D30Q9Y2I9 924 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 CRYL1Q9Y2S2 319 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 FAM32AQ9Y421 112 aaKnown RBP16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
PRPF40B-201ENST00000261897 A0A0J9YYE9 177 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 BCLAF3A2AJT9 711 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 PLSCR1O15162 318 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 GRID2O43424 1007 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 ASNA1O43681 348 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 HS6ST1O60243 411 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 NFKB1P19838 968 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 NEK2P51955 445 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 CTBSQ01459 385 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SPESP1Q6UW49 350 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 ZNF534Q76KX8 674 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SPATA22Q8NHS9 363 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 RANBP9Q96S59 729 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 HNRNPABQ99729 332 aaKnown RBP16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 RNF38Q9H0F5 515 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 ALG2Q9H553 416 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 RERGLQ9H628 205 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 CNGB3Q9NQW8 809 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 SMPD3Q9NY59 655 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 NDUFAF1Q9Y375 327 aa16.03■□□□□ 0.16
PRPF40B-201ENST00000261897 MYO1GB0I1T2 1018 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms