RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Pcdhb13Q91Y06 796 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Msi2Q920Q6 346 aaKnown RBP13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 KlbQ99N32 1043 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 AadacQ99PG0 398 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 StambpQ9CQ26 424 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Q9D454 513 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 NckipsdQ9ESJ4 714 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Jph2Q9ET78 696 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 TfebQ9R210 475 aa13.57□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gbf1Q6DFZ1 1861 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tnfrsf14A0A1W2P7D5 276 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Serpine3E9Q6A2 401 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ptpn20O55082 426 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ccnd1P25322 295 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Rplp2P99027 115 aaKnown RBP13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Samd11Q1RNF8 542 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 MlipQ5FW52 269 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gramd1bQ80TI0 738 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ofcc1Q8BGX4 166 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Pdcd2lQ8C5N5 364 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Fam204aQ8C6C7 236 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 ItchQ8C863 864 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Cdc26Q99JP4 85 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Acot13Q9CQR4 140 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Clic3Q9D7P7 237 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Pgam1Q9DBJ1 254 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Hey2Q9QUS4 339 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 PigqQ9QYT7 581 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Mtm1Q9Z2C5 603 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Cd2P08920 344 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Slc2a7P0C6A1 513 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Hoxd8P23463 289 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tfap2aP34056 437 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Rab17P35292 214 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tac1P41539 130 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Sec1P97353 368 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Psmb4P99026 264 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Upf3aQ3ULJ3 422 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Prss36Q5K2P8 849 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 ScapQ6GQT6 1276 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Nomo1Q6GQT9 1214 aaKnown RBP13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Rbm22Q8BHS3 420 aaKnown RBP13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Zmym6Q8BS54 1249 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Q8C5S3 137 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ipo11Q8K2V6 975 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Cwh43Q91YL7 699 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 SmtnQ921U8 923 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 DdoQ922Z0 341 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ggt7Q99JP7 662 aa13.56□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Vsig10l2A0A140LHF2 776 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Olfr1049A2ARZ0 308 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Kcnt2D3Z649 1135 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tnk2O54967 1055 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 PrkcdP28867 674 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Fam35aQ3UEN2 891 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Olfr533Q7TRT7 320 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Stk32aQ8BGW6 398 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Clic5Q8BXK9 251 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Aph1bQ8C7N7 257 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Aco2Q99KI0 780 aaKnown RBP13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ndufaf1Q9CWX2 328 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Scube2Q9JJS0 997 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Oaz3Q9R109 243 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Szt2A2A9C3 3431 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Trbv4A0A075B5I2 113 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Smok3cA0A087WSF2 504 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Zfp963D3Z2T8 383 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Bop1P97452 732 aaKnown RBP13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 CkbQ04447 381 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Serpina6Q06770 397 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 E330034G19RikQ3UWX6 351 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Psd2Q6P1I6 770 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Deup1Q7M6Y5 601 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Dnajc6Q80TZ3 938 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Usp8Q80U87 1080 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Asb14Q8C6Y6 587 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Ccdc63Q8CDV6 558 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gspt1Q8R050 636 aaKnown RBP13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Rprd1aQ8VDS4 312 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 March2Q99M02 246 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 PllpQ9DCU2 182 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Mpp6Q9JLB0 553 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Top3bQ9Z321 862 aaKnown RBP13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tp53bp1P70399 1969 aa13.55□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Klhdc7bA0A286YD60 1263 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Zfp946F6VWU8 523 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Adam15O88839 864 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gsta3P30115 221 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Folr1P35846 255 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Col19a1Q0VF58 1136 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Zyg11bQ3UFS0 744 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Olfr464Q5SW48 313 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Mfsd3Q5U419 412 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gpr19Q61121 415 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Arl13bQ640N2 427 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tas2r115Q7M719 310 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Noc4lQ8BHY2 516 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 CherpQ8CGZ0 936 aaKnown RBP13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gtse1Q8R080 741 aa13.54□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Retreg3Q9CQV4 466 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms