RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Rph3aP47708 681 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Ccr1P51675 355 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Otud5Q3U2S4 566 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Trim40Q3UWA4 246 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Runx1t1Q61909 577 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Tas2r125Q7M710 311 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 SyncripQ7TMK9 623 aaKnown RBP10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Olfr1037Q7TR84 321 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Atp2c1Q80XR2 918 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Samd4bQ80XS6 687 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Tyw1Q8BJM7 721 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Zbtb9Q8CDC7 459 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Myoz3Q8R4E4 245 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Fam20bQ8VCS3 409 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Olfr395Q8VGR3 312 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Ndc80Q9D0F1 642 aaKnown RBP10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Hmg20aQ9DC33 346 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Cdkl2Q9QUK0 568 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Gpc6Q9R087 555 aa10.77□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Smurf2A2A5Z6 748 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Vmn2r100E9QAZ9 850 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Gm6337K7N6X9 211 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Gm3115L7N285 211 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Cyp2c37P56654 490 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 BcheQ03311 603 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Tmem173Q3TBT3 378 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Q6GQU0 248 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Nars2Q8BGV0 477 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Cpsf4Q8BQZ5 211 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Ifi44Q8BV66 422 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 MaelQ8BVN9 434 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Akr1d1Q8VCX1 325 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Vps4aQ8VEJ9 437 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Rwdd2bQ99M03 290 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 NwcQ9CQI4 244 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Htr3bQ9JHJ5 437 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Rgs1Q9JL25 209 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Dnaja2Q9QYJ0 412 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Gm10477F6SW83 55 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Stmn3O70166 180 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Foxk1P42128 719 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Q5EBG8 199 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Myo1dQ5SYD0 1006 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Nlrp9cQ66X01 1004 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Mapk4Q6P5G0 583 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Nudcd1Q6PIP5 582 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Tcaf3Q6QR59 914 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Tdpoz3Q717B4 365 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Olfr389Q7TRX7 312 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Thop1Q8C1A5 687 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 BicralQ8CHH5 1074 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Zmynd11Q8R5C8 602 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Cep97Q9CZ62 856 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Slco1c1Q9ERB5 715 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Myh9Q8VDD5 1960 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Lamb1P02469 1786 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Dpy19l4A2AJQ3 722 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Ttll8A4Q9F1 832 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Sox2P48432 319 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Naa50Q6PGB6 169 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Kcnk18Q6VV64 394 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 AftphQ80WT5 931 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Mrps35Q8BJZ4 320 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Map1sQ8C052 973 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Ifi205aQ8CGE8 404 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Zbed3Q9D0L1 228 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Rhox9Q9EQM5 227 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 PollQ9QXE2 573 aaKnown RBP10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Slc7a8Q9QXW9 531 aa10.76□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Spin2dB1B0R2 236 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Zfp358E9Q8M1 571 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Vmn2r65G3X931 845 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Vcam1P29533 739 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Matn1P51942 500 aaKnown RBP10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Sdr16c6Q05A13 316 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Bcap29Q61334 240 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 HadhQ61425 314 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Wee2Q66JT0 555 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Wfikkn2Q7TQN3 571 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Clec4b1Q7TS58 209 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Dhx33Q80VY9 698 aaKnown RBP10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Sfrp1Q8C4U3 314 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Rtp1Q8C8C1 263 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 St7lQ8K4P7 559 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Impg1Q8R1W8 798 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Olfr356Q8VFP5 315 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Cdhr5Q8VHF2 831 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Pcdhb13Q91Y06 796 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Me2Q99KE1 589 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 ProzQ9CQW3 399 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 1700080O16RikQ9D9G4 284 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Sars2Q9JJL8 518 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Pkp3Q9QY23 797 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Scn9aQ62205 1984 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Farp1F8VPU2 1048 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Cyp2j8G3UZ38 503 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Gm8011K7N6Y5 207 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Il2rbP16297 539 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Shmt1P50431 478 aa10.75□□□□□ -0.69
Rnf40-201ENSMUST00000033088 Clec4fP70194 548 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms