RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ERVMER34-1Q9H9K5 563 aa17■□□□□ 0.31
CACNA1A-259ENST00000638114 LHX3Q9UBR4 397 aa17■□□□□ 0.31
CACNA1A-259ENST00000638114 FTSJ1Q9UET6 329 aa17■□□□□ 0.31
CACNA1A-259ENST00000638114 FRYQ5TBA9 3013 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 ARHGAP42A6NI28 874 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 C1QTNF9BB2RNN3 333 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 J3KR12 359 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 TNFSF14O43557 240 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 C1QTNF9P0C862 333 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 PCK1P35558 622 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 PAPOLAP51003 745 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 CLDN2P57739 230 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 ACAP1Q15027 740 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 CYTH1Q15438 398 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 SMTNL2Q2TAL5 461 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 SAP25Q8TEE9 199 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 NUP85Q9BW27 656 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 CALN1Q9BXU9 219 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 SLC17A9Q9BYT1 436 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 TSPY26PQ9H489 355 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 ZWILCHQ9H900 591 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 PDFQ9HBH1 243 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 ANAPC7Q9UJX3 599 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 ITM2BQ9Y287 266 aa16.99■□□□□ 0.31
CACNA1A-259ENST00000638114 AKAP13Q12802 2813 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 DFFAO00273 331 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 TSPAN6O43657 245 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 PRAMEF11O60813 436 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 PAK4O96013 591 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 TCF4P15884 667 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 IL1R2P27930 398 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 RXRGP48443 463 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 ZNF135P52742 658 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 BNIP3Q12983 259 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 FGL2Q14314 439 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 PIGHQ14442 188 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 CCDC157Q569K6 752 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 LRRC73Q5JTD7 316 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 CCDC122Q5T0U0 273 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 ALKBH5Q6P6C2 394 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 GCNT7Q6ZNI0 430 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 OR13H1Q8NG92 308 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 HSPH1Q92598 858 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 VOPP1Q96AW1 172 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 ARHGEF26Q96DR7 871 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 BTBD6Q96KE9 485 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 SP110Q9HB58 689 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 TOR4AQ9NXH8 423 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 CWC15Q9P013 229 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 IP6K2Q9UHH9 426 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 GGT7Q9UJ14 662 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 MSRB2Q9Y3D2 182 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 CACNA1BQ00975 2339 aa16.98■□□□□ 0.31
CACNA1A-259ENST00000638114 IGLON5A6NGN9 336 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 A6NNZ2 444 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 H3BRJ5 948 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 INSIG1O15503 277 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 SDC3O75056 442 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 CYP1A2P05177 515 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 PROS1P07225 676 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 ARL4AP40617 200 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 HCAR3P49019 387 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 SGCGQ13326 291 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 DPYSQ14117 519 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 PTAR1Q7Z6K3 402 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 TTC7BQ86TV6 843 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 ZSCAN30Q86W11 494 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 ARHGAP12Q8IWW6 846 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 EID2Q8N6I1 236 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 NPWQ8N729 165 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 GATA6Q92908 595 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 MFHAS1Q9Y4C4 1052 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 USP24Q9UPU5 2620 aa16.97■□□□□ 0.31
CACNA1A-259ENST00000638114 IGF2RP11717 2491 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 RAD51BO15315 384 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 SPINT1O43278 529 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 PALMO75781 387 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 PIGNO95427 931 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 LDOC1O95751 146 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 XPAP23025 273 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 EIF4A3P38919 411 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 SSR1P43307 286 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 TRIM14Q14142 442 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 DPYSL2Q16555 572 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 BOLA3Q53S33 107 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 AFMIDQ63HM1 303 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 Q6ZSR6 202 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 ABI3BPQ7Z7G0 1075 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 NIPA2Q8N8Q9 360 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 RNF214Q8ND24 703 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 CNDP2Q96KP4 475 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 CINPQ9BW66 212 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 TMEM121BQ9BXQ6 578 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 CPEB1Q9BZB8 566 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 DKK3Q9UBP4 350 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 HS3ST3A1Q9Y663 406 aa16.96■□□□□ 0.31
CACNA1A-259ENST00000638114 COL5A1P20908 1838 aaPredicted RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms