RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 APOBEC2Q9Y235 224 aaKnown RBP14.01□□□□□ -0.17
PNKP-228ENST00000637325 CA5BQ9Y2D0 317 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 FADS3Q9Y5Q0 445 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 CEP295Q9C0D2 2601 aa14.01□□□□□ -0.17
PNKP-228ENST00000637325 GOLGA8CPA6NN73 597 aa14□□□□□ -0.17
PNKP-228ENST00000637325 J3KR12 359 aa14□□□□□ -0.17
PNKP-228ENST00000637325 MYO1FO00160 1098 aa14□□□□□ -0.17
PNKP-228ENST00000637325 TSPAN6O43657 245 aa14□□□□□ -0.17
PNKP-228ENST00000637325 AP1G1O43747 822 aa14□□□□□ -0.17
PNKP-228ENST00000637325 CBFA2T3O75081 653 aa14□□□□□ -0.17
PNKP-228ENST00000637325 TOP3BO95985 862 aaKnown RBP14□□□□□ -0.17
PNKP-228ENST00000637325 CYP1A2P05177 515 aa14□□□□□ -0.17
PNKP-228ENST00000637325 FTH1P19P0C7X4 201 aa14□□□□□ -0.17
PNKP-228ENST00000637325 SPINK2P20155 84 aa14□□□□□ -0.17
PNKP-228ENST00000637325 XPAP23025 273 aaPredicted RBP14□□□□□ -0.17
PNKP-228ENST00000637325 HCAR3P49019 387 aa14□□□□□ -0.17
PNKP-228ENST00000637325 SGCGQ13326 291 aa14□□□□□ -0.17
PNKP-228ENST00000637325 CYTH1Q15438 398 aa14□□□□□ -0.17
PNKP-228ENST00000637325 TTC7BQ86TV6 843 aa14□□□□□ -0.17
PNKP-228ENST00000637325 GATAD2AQ86YP4 633 aa14□□□□□ -0.17
PNKP-228ENST00000637325 OR8K1Q8NGG5 319 aa14□□□□□ -0.17
PNKP-228ENST00000637325 ARHGEF26Q96DR7 871 aa14□□□□□ -0.17
PNKP-228ENST00000637325 SCNM1Q9BWG6 230 aa14□□□□□ -0.17
PNKP-228ENST00000637325 ERVMER34-1Q9H9K5 563 aa14□□□□□ -0.17
PNKP-228ENST00000637325 SP110Q9HB58 689 aa14□□□□□ -0.17
PNKP-228ENST00000637325 FZD3Q9NPG1 666 aa14□□□□□ -0.17
PNKP-228ENST00000637325 CWC15Q9P013 229 aaKnown RBP14□□□□□ -0.17
PNKP-228ENST00000637325 ZFR2Q9UPR6 939 aaKnown RBP14□□□□□ -0.17
PNKP-228ENST00000637325 BTBD3Q9Y2F9 522 aa14□□□□□ -0.17
PNKP-228ENST00000637325 HYAL3O43820 417 aaPredicted RBP13.99□□□□□ -0.17
PNKP-228ENST00000637325 PRAMEF11O60813 436 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 PALMO75781 387 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 THEGLP0DJG4 465 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 IL1R2P27930 398 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 HNRNPH3P31942 346 aaKnown RBP13.99□□□□□ -0.17
PNKP-228ENST00000637325 KRT81Q14533 505 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 HADHQ16836 314 aaKnown RBP13.99□□□□□ -0.17
PNKP-228ENST00000637325 CFAP58Q5T655 872 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 CYP4V2Q6ZWL3 525 aaPredicted RBP13.99□□□□□ -0.17
PNKP-228ENST00000637325 GLRX5Q86SX6 157 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 ZSCAN30Q86W11 494 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 CHCHD4Q8N4Q1 142 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 PNPLA1Q8N8W4 532 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 ZNF564Q8TBZ8 553 aaPredicted RBP13.99□□□□□ -0.17
PNKP-228ENST00000637325 EXOC2Q96KP1 924 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 SLC17A9Q9BYT1 436 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.99□□□□□ -0.17
PNKP-228ENST00000637325 CTTNBP2NLQ9P2B4 639 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 LHX3Q9UBR4 397 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 MFHAS1Q9Y4C4 1052 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 PLXNB3Q9ULL4 1909 aa13.99□□□□□ -0.17
PNKP-228ENST00000637325 IGLON5A6NGN9 336 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 INSIG1O15503 277 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 TNFSF14O43557 240 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 AKR1B10O60218 316 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 PAK4O96013 591 aaPredicted RBP13.98□□□□□ -0.17
PNKP-228ENST00000637325 H2AFZP0C0S5 128 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 RARAP10276 462 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 AMPD1P23109 780 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 ABL2P42684 1182 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 RXRGP48443 463 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 CLDN2P57739 230 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 DPYSQ14117 519 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 GRM3Q14832 879 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 DPYSL2Q16555 572 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 SLC18A3Q16572 532 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 TMEM259Q4ZIN3 620 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 TMCO3Q6UWJ1 677 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 H2AFVQ71UI9 128 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 SPATS2Q86XZ4 545 aaKnown RBP13.98□□□□□ -0.17
PNKP-228ENST00000637325 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 PAF1Q8N7H5 531 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 NIPA2Q8N8Q9 360 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 TMEM145Q8NBT3 493 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 FAM174AQ8TBP5 190 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 TEKT4Q8WW24 435 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 CTNNBL1Q8WYA6 563 aaPredicted RBP13.98□□□□□ -0.17
PNKP-228ENST00000637325 CINPQ9BW66 212 aaPredicted RBP13.98□□□□□ -0.17
PNKP-228ENST00000637325 CALN1Q9BXU9 219 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 CPEB1Q9BZB8 566 aaKnown RBP13.98□□□□□ -0.17
PNKP-228ENST00000637325 PDFQ9HBH1 243 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 FTSJ1Q9UET6 329 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 HS3ST3A1Q9Y663 406 aa13.98□□□□□ -0.17
PNKP-228ENST00000637325 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
PNKP-228ENST00000637325 A6NNZ2 444 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 PIGNO95427 931 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 ATXN1LP0C7T5 689 aaKnown RBP13.97□□□□□ -0.17
PNKP-228ENST00000637325 TCF4P15884 667 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 EPHA8P29322 1005 aaPredicted RBP13.97□□□□□ -0.17
PNKP-228ENST00000637325 CDH6P55285 790 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 IL10RBQ08334 325 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 BNIP3Q12983 259 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 SHBQ15464 509 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 CCDC157Q569K6 752 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 LRRC73Q5JTD7 316 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 AFMIDQ63HM1 303 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 Q6ZSR6 202 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 POLNQ7Z5Q5 900 aa13.97□□□□□ -0.17
PNKP-228ENST00000637325 PTAR1Q7Z6K3 402 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms