RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 NELL1Q92832 810 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 NSUN4Q96CB9 384 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 FDXACB1Q9BRP7 624 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TKTL2Q9H0I9 626 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 ITGA11Q9UKX5 1188 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 QRICH2Q9H0J4 1663 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 METP08581 1390 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 CYP4B1P13584 511 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 NAT16Q8N8M0 369 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 RFT1Q96AA3 541 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D30Q9Y2I9 924 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 QSOX1O00391 747 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 WDR93Q6P2C0 686 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 RTL4Q6ZR62 310 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 LOC110117498-PIK3R3F6TDL0 507 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 GATBO75879 557 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 MSLNQ13421 630 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 SLC26A11Q86WA9 606 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 DENND1CQ8IV53 801 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 PIK3R3Q92569 461 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 MYDGFQ969H8 173 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3DA0A087WVF3 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3IA0A087WXS9 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3EA0A087X179 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3KA0A087X1G2 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3FA6NER0 549 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3LB9A6J9 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3HP0C7X1 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 MPP2Q14168 576 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 SF1Q15637 639 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3GQ6DHY5 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3CQ6IPX1 549 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBC1D3Q8IZP1 549 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 C2orf73Q8N5S3 287 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 CDYL2Q8N8U2 506 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 HIST1H2AAQ96QV6 131 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 FOXN3O00409 490 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TRIM38O00635 465 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 IKBKEQ14164 716 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 CWF19L1Q69YN2 538 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 RNF208Q9H0X6 261 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 MRPS23Q9Y3D9 190 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 DCXO43602 365 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TBL1XO60907 577 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 MANFP55145 182 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 C16orf86Q6ZW13 317 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 TTC7BQ86TV6 843 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 GPR135Q8IZ08 494 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 SERPINB11Q96P15 392 aa17.66■□□□□ 0.42
CACNA1A-225ENST00000636389 YBX3P16989 372 aaKnown RBP eCLIP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 SLC6A2P23975 617 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 HNRNPH1P31943 449 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ACTR3P61158 418 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 PPP1R15BQ5SWA1 713 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ERICH5Q6P6B1 374 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 PTCHD4Q6ZW05 846 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 POC5Q8NA72 575 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 SMPDL3BQ92485 455 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ZNF607Q96SK3 696 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 C17orf75Q9HAS0 396 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ASAH2Q9NR71 780 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 SAMD4AQ9UPU9 718 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 RECQL5O94762 991 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ANKS1AQ92625 1134 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 MROH8Q9H579 483 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 CLIC5Q9NZA1 410 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 TSPAN16Q9UKR8 245 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 MAPRE3Q9UPY8 281 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 SLC26A3P40879 764 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 GRIK4Q16099 956 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 TRMT5Q32P41 509 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ARHGAP36Q6ZRI8 547 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ARHGEF19Q8IW93 802 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 PLGRKTQ9HBL7 147 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 A0A1B0GTH6 734 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 FAM86B1E9PN63 330 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 RIPK1Q13546 671 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 DENND6BQ8NEG7 585 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 TDRD1Q9BXT4 1180 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ALG9Q9H6U8 611 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 DKK3Q9UBP4 350 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 ATP7BP35670 1465 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 PLGP00747 810 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 CAPGP40121 348 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 CD86P42081 329 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 MYL6P60660 151 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 CDRT15Q96T59 188 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 MTA3Q9BTC8 594 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 PFDN2Q9UHV9 154 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 NOX1Q9Y5S8 564 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 OAS3Q9Y6K5 1087 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 MAGEA2P43356 314 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 GDI2P50395 445 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 NDST1P52848 882 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 PIH1D2Q8WWB5 315 aa17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-225ENST00000636389 SLC9A3R1O14745 358 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms