RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CTNND2Q9UQB3 1225 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 DOCK4Q8N1I0 1966 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 DOPEY2Q9Y3R5 2298 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 FAM170AA1A519 330 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 C16orf96A6NNT2 1141 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 BECN2A8MW95 431 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 NTN3O00634 580 aaPredicted RBP14.92□□□□□ -0.02
PNKP-218ENST00000625299 RPLP0P05388 317 aaKnown RBP14.92□□□□□ -0.02
PNKP-218ENST00000625299 JMJD7P0C870 316 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 IGFALSP35858 605 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 CXCR3P49682 368 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 INHBCP55103 352 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 ARF5P84085 180 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 SLC6A3Q01959 620 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 PPARDQ03181 441 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 DEUP1Q05D60 604 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
PNKP-218ENST00000625299 SRSF1Q07955 248 aaKnown RBP eCLIP14.92□□□□□ -0.02
PNKP-218ENST00000625299 EIF3IQ13347 325 aaKnown RBP14.92□□□□□ -0.02
PNKP-218ENST00000625299 PTPN20Q4JDL3 420 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 COLEC12Q5KU26 742 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 TTI2Q6NXR4 508 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 ENOSF1Q7L5Y1 443 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 SLC26A9Q7LBE3 791 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 VASH2Q86V25 355 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 DRC7Q8IY82 874 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 ARL10Q8N8L6 244 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 KYQ8NBH2 561 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 PCDH19Q8TAB3 1148 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 CRACR2AQ9BSW2 395 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 CPEB1Q9BZB8 566 aaKnown RBP14.92□□□□□ -0.02
PNKP-218ENST00000625299 STARD5Q9NSY2 213 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.92□□□□□ -0.02
PNKP-218ENST00000625299 RABGEF1Q9UJ41 708 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 STAP1Q9ULZ2 295 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 PCDHGA7Q9Y5G6 932 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 ATP6V1DQ9Y5K8 247 aa14.92□□□□□ -0.02
PNKP-218ENST00000625299 UBR5O95071 2799 aaPredicted RBP14.92□□□□□ -0.02
PNKP-218ENST00000625299 ILVBLA1L0T0 632 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 GOLGA6L4A6NEF3 574 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 DRGXA6NNA5 263 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 D6RAR5 112 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 KRIT1O00522 736 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 NOBOXO60393 691 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 ZMPSTE24O75844 475 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 ITGB2P05107 769 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 UGT2B4P06133 528 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 LIPCP11150 499 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 STX17P56962 302 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 SNX16P57768 344 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 CCL7P80098 99 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 APBA1Q02410 837 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 MANEAQ5SRI9 462 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 MACC1Q6ZN28 852 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 SPATA20Q8TB22 786 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 SCG3Q8WXD2 468 aaKnown RBP14.91□□□□□ -0.02
PNKP-218ENST00000625299 RAB7BQ96AH8 199 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 TBCBQ99426 244 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 NPY6RQ99463 290 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 SRRTQ9BXP5 876 aaKnown RBP14.91□□□□□ -0.02
PNKP-218ENST00000625299 PLCB1Q9NQ66 1216 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 PAXBP1Q9Y5B6 917 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 SCN8AQ9UQD0 1980 aa14.91□□□□□ -0.02
PNKP-218ENST00000625299 TLN1Q9Y490 2541 aaKnown RBP14.91□□□□□ -0.02
PNKP-218ENST00000625299 BICDL2A1A5D9 508 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 MMP20O60882 483 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 CTSEP14091 401 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 ITGB6P18564 788 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 ITIH1P19827 911 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 EIF4A3P38919 411 aaKnown RBP14.9□□□□□ -0.02
PNKP-218ENST00000625299 GNA12Q03113 381 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 SLC20A2Q08357 652 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 ZNF805Q5CZA5 627 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 XKR5Q6UX68 686 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 ZNF783Q6ZMS7 281 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 RD3Q7Z3Z2 195 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 HID1Q8IV36 788 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 CXorf40AQ8TE69 158 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 ASB12Q8WXK4 309 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 CENPTQ96BT3 561 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 TBATAQ96M53 351 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 KLHL32Q96NJ5 620 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 WRAP53Q9BUR4 548 aaKnown RBP14.9□□□□□ -0.02
PNKP-218ENST00000625299 MBNL1Q9NR56 388 aaKnown RBP14.9□□□□□ -0.02
PNKP-218ENST00000625299 RRN3Q9NYV6 651 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 SEPT10Q9P0V9 454 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 HOOK1Q9UJC3 728 aaKnown RBP14.9□□□□□ -0.02
PNKP-218ENST00000625299 MAN1B1Q9UKM7 699 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 PCDHGC3Q9UN70 934 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 LOXL2Q9Y4K0 774 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 PCDHGA4Q9Y5G9 962 aa14.9□□□□□ -0.02
PNKP-218ENST00000625299 CHD5Q8TDI0 1954 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 IGLV3-10A0A075B6K4 115 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 PRAMEF33A0A0G2JMD5 474 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 TMX2-CTNND1H3BSU7 103 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 SUV39H1O43463 412 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 PRAMEF10O60809 474 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 TM7SF2O76062 418 aa14.89□□□□□ -0.03
PNKP-218ENST00000625299 GNA14O95837 355 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms