RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NAP1L3Q99457 506 aaPredicted RBP16.42■□□□□ 0.22
CD40-207ENST00000620709 TMEM59LQ9UK28 342 aa16.42■□□□□ 0.22
CD40-207ENST00000620709 TBC1D30Q9Y2I9 924 aa16.42■□□□□ 0.22
CD40-207ENST00000620709 FARP1Q9Y4F1 1045 aaPredicted RBP16.42■□□□□ 0.22
CD40-207ENST00000620709 OR51B4Q9Y5P0 310 aa16.42■□□□□ 0.22
CD40-207ENST00000620709 C2CD4BA6NLJ0 364 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 MT-CO1P00395 513 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 SSR1P43307 286 aaKnown RBP16.41■□□□□ 0.22
CD40-207ENST00000620709 ZNF143P52747 638 aaPredicted RBP16.41■□□□□ 0.22
CD40-207ENST00000620709 ATP11AP98196 1134 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 INAVAQ3KP66 663 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 LRRC38Q5VT99 294 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 LINGO4Q6UY18 593 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 DBX2Q6ZNG2 339 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 ARCQ7LC44 396 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 FAM131BQ86XD5 332 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 SPATA4Q8NEY3 305 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 BAHD1Q8TBE0 780 aaPredicted RBP16.41■□□□□ 0.22
CD40-207ENST00000620709 ELF4Q99607 663 aaPredicted RBP16.41■□□□□ 0.22
CD40-207ENST00000620709 SPON2Q9BUD6 331 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 C2orf49Q9BVC5 232 aaPredicted RBP16.41■□□□□ 0.22
CD40-207ENST00000620709 GDF3Q9NR23 364 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 SMARCAL1Q9NZC9 954 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 FTSJ1Q9UET6 329 aa16.41■□□□□ 0.22
CD40-207ENST00000620709 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.41■□□□□ 0.22
CD40-207ENST00000620709 V9GYY5 206 aaPredicted RBP16.41■□□□□ 0.22
CD40-207ENST00000620709 DMXL2Q8TDJ6 3036 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 A0A0D9SEW6 157 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 A0A1B0GTQ1 180 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
CD40-207ENST00000620709 E9PAM4 449 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 I6L893 689 aaPredicted RBP16.4■□□□□ 0.22
CD40-207ENST00000620709 K7ERQ8 282 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 KPNA3O00505 521 aaPredicted RBP16.4■□□□□ 0.22
CD40-207ENST00000620709 DFNA5O60443 496 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 ENDOD1O94919 500 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 ITGAVP06756 1048 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 SRCP12931 536 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 OR1E1P30953 314 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 TAS2R40P59535 323 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 CDO1Q16878 200 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 C5orf22Q49AR2 442 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 RXFP2Q8WXD0 754 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 PGAP3Q96FM1 320 aaPredicted RBP16.4■□□□□ 0.22
CD40-207ENST00000620709 CCDC114Q96M63 670 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 CNPY3Q9BT09 278 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 VPS51Q9UID3 782 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 PPM1HQ9ULR3 514 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 FAM221BA6H8Z2 402 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 TLR4O00206 839 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 MCF2LO15068 1137 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 TNFSF14O43557 240 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 PCDHGA12O60330 932 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 RNF8O76064 485 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 SDC4P31431 198 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 C2orf54Q08AI8 447 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 SCAPQ12770 1279 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 ZNF211Q13398 564 aaPredicted RBP16.4■□□□□ 0.22
CD40-207ENST00000620709 HADHQ16836 314 aaKnown RBP16.4■□□□□ 0.22
CD40-207ENST00000620709 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 C6orf118Q5T5N4 469 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 TRNP1Q6NT89 227 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 MARCH9Q86YJ5 346 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 KATNAL2Q8IYT4 538 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 OR7D4Q8NG98 312 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 KLK6Q92876 244 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 NT5C3BQ969T7 300 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 MYOCQ99972 504 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 TNKS2Q9H2K2 1166 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 DYRK4Q9NR20 520 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 TOR4AQ9NXH8 423 aa16.4■□□□□ 0.22
CD40-207ENST00000620709 FREM2Q5SZK8 3169 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 A0A1W2PR77 199 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 DRGXA6NNA5 263 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 CBX4O00257 560 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 ALOX15BO15296 676 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 SLC7A4O43246 635 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 SMAD6O43541 496 aaKnown RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 PLRG1O43660 514 aaKnown RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 LRCH4O75427 683 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 FGGP02679 453 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 GLDCP23378 1020 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 GJC1P36383 396 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 RECQLP46063 649 aaPredicted RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 VASPP50552 380 aaPredicted RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 STAT4Q14765 748 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 LONRF2Q1L5Z9 754 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 AGBL4Q5VU57 503 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 NAPEPLDQ6IQ20 393 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 CCNI2Q6ZMN8 369 aaPredicted RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 SETD3Q86TU7 594 aaPredicted RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 ZNF683Q8IZ20 524 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 GRIN3AQ8TCU5 1115 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 C1orf74Q96LT6 269 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 NCAPGQ9BPX3 1015 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 DDX56Q9NY93 547 aaKnown RBP16.39■□□□□ 0.21
CD40-207ENST00000620709 HS3ST2Q9Y278 367 aa16.39■□□□□ 0.21
CD40-207ENST00000620709 RNGTTO60942 597 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms