RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TBR1Q16650 682 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ZNF805Q5CZA5 627 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 LINGO4Q6UY18 593 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 MACC1Q6ZN28 852 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 PARS2Q7L3T8 475 aaKnown RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 GKN2Q86XP6 184 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ZDHHC17Q8IUH5 632 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ARHGEF19Q8IW93 802 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ATL2Q8NHH9 583 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 CENPTQ96BT3 561 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 KREMEN1Q96MU8 473 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 CMKLR1Q99788 373 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 OSBPL1AQ9BXW6 950 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 TKTL2Q9H0I9 626 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ADNPQ9H2P0 1102 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 SYNCQ9H7C4 482 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 UBE2TQ9NPD8 197 aaPredicted RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 ARHGEF38Q9NXL2 777 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 AKAP7Q9P0M2 348 aaPredicted RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 ANKMY1Q9P2S6 941 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 HECAQ9UBI9 543 aaPredicted RBP9.15□□□□□ -0.94
SMG6-218ENST00000575454 STAP1Q9ULZ2 295 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 LOXL2Q9Y4K0 774 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
SMG6-218ENST00000575454 ZNF821O75541 412 aaPredicted RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 DAB1O75553 588 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 GRAP2O75791 330 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 RPLP0P05388 317 aaKnown RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 GP1BBP13224 206 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 CTSEP14091 401 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 PNLIPP16233 465 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 HTR1BP28222 390 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 EIF4A3P38919 411 aaKnown RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 CXCR3P49682 368 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 PMS1P54277 932 aaKnown RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 SLC6A3Q01959 620 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 TLE1Q04724 770 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 SERINC3Q13530 473 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 POLD3Q15054 466 aaPredicted RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 TGIF1Q15583 401 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 ALFQ53S48 1182 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 FOXR2Q6PJQ5 311 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 SLC26A9Q7LBE3 791 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 TFAP2DQ7Z6R9 452 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 B3GNT8Q7Z7M8 397 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 RBFAQ8N0V3 343 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 RYBPQ8N488 228 aaPredicted RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 C1orf131Q8NDD1 294 aaKnown RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 ZNF397Q8NF99 534 aaPredicted RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 CCDC74AQ96AQ1 378 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 PGAP3Q96FM1 320 aaPredicted RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 CPEB1Q9BZB8 566 aaKnown RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 EDEM3Q9BZQ6 932 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 INTS2Q9H0H0 1204 aaKnown RBP9.14□□□□□ -0.95
SMG6-218ENST00000575454 LRRN3Q9H3W5 708 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 RETREG1Q9H6L5 497 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 CAAP1Q9H8G2 361 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 ATP13A1Q9HD20 1204 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 PISDQ9UG56 409 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 APPL1Q9UKG1 709 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 GPR34Q9UPC5 381 aa9.14□□□□□ -0.95
SMG6-218ENST00000575454 LRBAP50851 2863 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 IGLV3-10A0A075B6K4 115 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 RNF103O00237 685 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 ZW10O43264 779 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 ZMPSTE24O75844 475 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 TM7SF2O76062 418 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 RASGRP1O95267 797 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 POP4O95707 220 aaKnown RBP9.13□□□□□ -0.95
SMG6-218ENST00000575454 GGCXP38435 758 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 SUOXP51687 545 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 HK3P52790 923 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 CCL7P80098 99 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 NFKB2Q00653 900 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 PNOCQ13519 176 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 PKP1Q13835 747 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 TPRG1LQ5T0D9 272 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 BORAQ6PGQ7 559 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 OLFML1Q6UWY5 402 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 FAM183BPQ6ZVS7 135 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 TTC7BQ86TV6 843 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 VPS36Q86VN1 386 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 ZNF683Q8IZ20 524 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 OR7D4Q8NG98 312 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 SPATA20Q8TB22 786 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 CXorf40AQ8TE69 158 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 SMARCE1Q969G3 411 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 HAPLN3Q96S86 360 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 CPXM1Q96SM3 734 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 FOXP3Q9BZS1 431 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 CLPBQ9H078 707 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 TCEAL2Q9H3H9 227 aaPredicted RBP9.13□□□□□ -0.95
SMG6-218ENST00000575454 ZDHHC6Q9H6R6 413 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 PIGVQ9NUD9 493 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMG6-218ENST00000575454 PPARGC1AQ9UBK2 798 aaKnown RBP9.13□□□□□ -0.95
SMG6-218ENST00000575454 TUBD1Q9UJT1 453 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 HPCAL4Q9UM19 191 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
SMG6-218ENST00000575454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms