RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MBNL1Q9NR56 388 aaKnown RBP20.17■□□□□ 0.82
DDX11-220ENST00000542244 SIGLEC16A6NMB1 481 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 AREL1O15033 823 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 SCAMP1O15126 338 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 BUB1O43683 1085 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 OPA1O60313 960 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 MMP20O60882 483 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 GSRP00390 522 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 CSF2P04141 144 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 CDK4P11802 303 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 ATP1A3P13637 1013 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 TIMP2P16035 220 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 IGFALSP35858 605 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 PFN3P60673 137 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 PDE1CQ14123 709 aaPredicted RBP20.16■□□□□ 0.82
DDX11-220ENST00000542244 CYTH1Q15438 398 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 SLFN11Q7Z7L1 901 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 PLPP6Q8IY26 295 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 C3orf20Q8ND61 904 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 CENPTQ96BT3 561 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 EXOC2Q96KP1 924 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 MCEEQ96PE7 176 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 AGPAT1Q99943 283 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 SEPT11Q9NVA2 429 aaKnown RBP20.16■□□□□ 0.82
DDX11-220ENST00000542244 TMEM51Q9NW97 253 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 NLGN3Q9NZ94 848 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 LHX3Q9UBR4 397 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 FZD10Q9ULW2 581 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 BPTFQ12830 3046 aa20.16■□□□□ 0.82
DDX11-220ENST00000542244 A0A1W2PNU3 283 aaPredicted RBP20.15■□□□□ 0.82
DDX11-220ENST00000542244 CREB3O43889 395 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 GCATO75600 419 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 NME1P15531 152 aaKnown RBP20.15■□□□□ 0.82
DDX11-220ENST00000542244 EPHB2P29323 1055 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 UBXN1Q04323 297 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 C1orf61Q13536 156 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 CA9Q16790 459 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 DEFB133Q30KQ1 61 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 GDPD4Q6W3E5 623 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 VPS36Q86VN1 386 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 RTL3Q8N8U3 475 aaKnown RBP20.15■□□□□ 0.82
DDX11-220ENST00000542244 NEK11Q8NG66 645 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 LENG8Q96PV6 779 aaPredicted RBP20.15■□□□□ 0.82
DDX11-220ENST00000542244 COQ6Q9Y2Z9 468 aa20.15■□□□□ 0.82
DDX11-220ENST00000542244 COL27A1Q8IZC6 1860 aaPredicted RBP20.15■□□□□ 0.82
DDX11-220ENST00000542244 PMS2P1A4D2B8 440 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 RASA4BC9J798 803 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 TEX33O43247 280 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 RASA4O43374 803 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 TSPAN6O43657 245 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 PIGNO95427 931 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 POP4O95707 220 aaKnown RBP20.14■□□□□ 0.81
DDX11-220ENST00000542244 PRB1P04280 392 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 CELA2BP08218 269 aaPredicted RBP20.14■□□□□ 0.81
DDX11-220ENST00000542244 ABCG1P45844 678 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 ZNF143P52747 638 aaPredicted RBP20.14■□□□□ 0.81
DDX11-220ENST00000542244 SNRPD1P62314 119 aaKnown RBP20.14■□□□□ 0.81
DDX11-220ENST00000542244 SGCGQ13326 291 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 CDKN3Q16667 212 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 KCTD16Q68DU8 428 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 GUSBP11Q6P575 273 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 CRTC1Q6UUV9 634 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 ZNF354CQ86Y25 554 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 ARFGAP1Q8N6T3 406 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 LMX1AQ8TE12 382 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 IFT43Q96FT9 208 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 SYT11Q9BT88 431 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 WRAP53Q9BUR4 548 aaKnown RBP20.14■□□□□ 0.81
DDX11-220ENST00000542244 ASXL3Q9C0F0 2248 aa20.14■□□□□ 0.81
DDX11-220ENST00000542244 J3KR12 359 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 NEMP1O14524 444 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 FPGTO14772 594 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 ATMINO43313 823 aaPredicted RBP20.13■□□□□ 0.81
DDX11-220ENST00000542244 PRKCGP05129 697 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 MPOP05164 745 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 CALB1P05937 261 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 JUNDP17535 347 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 TGM2P21980 687 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 ETFBP38117 255 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 RABIFP47224 123 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 HNRNPKP61978 463 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDX11-220ENST00000542244 E2F1Q01094 437 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 MYL5Q02045 173 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 TCEA2Q15560 299 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 DNAJC24Q6P3W2 148 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 IRF2BP2Q7Z5L9 587 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 TTC7BQ86TV6 843 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 PARGQ86W56 976 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 ZSWIM9Q86XI8 627 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 MCOLN2Q8IZK6 566 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 CACTIN-AS1Q8N1I8 211 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 IFI44Q8TCB0 444 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 FUBP1Q96AE4 644 aaKnown RBP20.13■□□□□ 0.81
DDX11-220ENST00000542244 CELF6Q96J87 481 aaKnown RBP20.13■□□□□ 0.81
DDX11-220ENST00000542244 NSMCE3Q96MG7 304 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 ERGIC2Q96RQ1 377 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 TRIM7Q9C029 511 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 TTYH3Q9C0H2 523 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 PRORYQ9H606 182 aa20.13■□□□□ 0.81
DDX11-220ENST00000542244 HPCAL4Q9UM19 191 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms