RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 FADS3Q9Y5Q0 445 aa9.38□□□□□ -0.91
CHMP4A-205ENST00000531158 ZFC3H1O60293 1989 aaKnown RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 ABCA12Q86UK0 2595 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 DOPEY1Q5JWR5 2465 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 FAM170AA1A519 330 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 CPED1A4D0V7 1026 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 EME2A4GXA9 379 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 M0QYT0 321 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 AQP9O43315 295 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 SMC2O95347 1197 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 AFPP02771 609 aaKnown RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PRNPP04156 253 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 CELA2BP08218 269 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PNMA6AP0CW24 399 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC9A1P19634 815 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 ITGB7P26010 798 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 GKP32189 559 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 NEK3P51956 506 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 STX17P56962 302 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 HNRNPKP61978 463 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 FANCCQ00597 558 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 SRSF6Q13247 344 aaKnown RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PDE1CQ14123 709 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 EFHC1Q5JVL4 640 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 FOXR2Q6PJQ5 311 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 BNIPLQ7Z465 357 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 CLEC14AQ86T13 490 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PARGQ86W56 976 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC35F3Q8IY50 421 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 EXD3Q8N9H8 876 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 NELFBQ8WX92 580 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 SHC3Q92529 594 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 CRACR2AQ9BSW2 395 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 LRRC61Q9BV99 259 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 C2orf49Q9BVC5 232 aaPredicted RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 BOCQ9BWV1 1114 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 XPO4Q9C0E2 1151 aaKnown RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 TKTL2Q9H0I9 626 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 USP29Q9HBJ7 922 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PLCB1Q9NQ66 1216 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 THSD1Q9NS62 852 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 IFNKQ9P0W0 207 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC12A6Q9UHW9 1150 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 RABGEF1Q9UJ41 708 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PCDHGC3Q9UN70 934 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 CTNND2Q9UQB3 1225 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 PCDHGA8Q9Y5G5 932 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 HS3ST3A1Q9Y663 406 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
CHMP4A-205ENST00000531158 NEMP2A6NFY4 417 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 IGLON5A6NGN9 336 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 BIN1O00499 593 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 MUSKO15146 869 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 MED7O43513 233 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 NOBOXO60393 691 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 ALPPL2P10696 532 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 SKILP12757 684 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 TNNT1P13805 278 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 NOS2P35228 1153 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 IGFALSP35858 605 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 SERPINH1P50454 418 aaKnown RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 CLCN6P51797 869 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 CCNHP51946 323 aaPredicted RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 RIPPLY3P57055 190 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 PFN3P60673 137 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 RPS21P63220 83 aaKnown RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 KRT83P78385 493 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 SLC6A3Q01959 620 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 CETN1Q12798 172 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 C1orf61Q13536 156 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 MORC3Q14149 939 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 TPD52L1Q16890 204 aaPredicted RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 LINC00303Q3SY05 128 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 GLIPR1L2Q4G1C9 344 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 RAB6CQ53S08 254 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 KCTD16Q68DU8 428 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 KIAA1161Q6NSJ0 714 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 DPY19L2P1Q6NXN4 242 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 B3GNT8Q7Z7M8 397 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 SETD3Q86TU7 594 aaPredicted RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 OR6K2Q8NGY2 324 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 TBCBQ99426 244 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 DUSP23Q9BVJ7 150 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 CLPBQ9H078 707 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 RAB6CQ9H0N0 254 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 ABCG4Q9H172 646 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 HSD3B7Q9H2F3 369 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 SIX2Q9NPC8 291 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 NEU3Q9UQ49 428 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 CSNK1G3Q9Y6M4 447 aa9.36□□□□□ -0.91
CHMP4A-205ENST00000531158 USP9YO00507 2555 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms