RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 YIPF1Q9Y548 306 aa14.63□□□□□ -0.07
CHD3-211ENST00000481999 ZFP37Q9Y6Q3 630 aaPredicted RBP14.63□□□□□ -0.07
CHD3-211ENST00000481999 TRANK1O15050 2925 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 AURKAO14965 403 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
CHD3-211ENST00000481999 RAMP2O60895 175 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 USP1O94782 785 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 VAPBO95292 243 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 PIRTP0C851 137 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TACR2P21452 398 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 ATP5C1P36542 298 aaKnown RBP14.62□□□□□ -0.07
CHD3-211ENST00000481999 TWF1Q12792 350 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 PRPSAP1Q14558 356 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 ZNF460Q14592 562 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TSNAXIP1Q2TAA8 658 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 ATG14Q6ZNE5 492 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 C16orf59Q7L2K0 433 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 CCNJLQ8IV13 435 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 SLC39A11Q8N1S5 342 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 DCLK2Q8N568 766 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TEX9Q8N6V9 391 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 ARMCX1Q9P291 453 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 PPARGC1AQ9UBK2 798 aaKnown RBP14.62□□□□□ -0.07
CHD3-211ENST00000481999 MARCOQ9UEW3 520 aaPredicted RBP14.62□□□□□ -0.07
CHD3-211ENST00000481999 MIA3Q5JRA6 1907 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 CAPN14A8MX76 684 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 MMP2P08253 660 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 BMP1P13497 986 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 KCNA4P22459 653 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 ADRA1AP35348 466 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 GCKP35557 465 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 WNT3AP56704 352 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 MPP1Q00013 466 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 NRG1Q02297 640 aaPredicted RBP14.62□□□□□ -0.07
CHD3-211ENST00000481999 BLMHQ13867 455 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 CNGA3Q16281 694 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 SPANXN3Q5MJ09 141 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TMEM150AQ86TG1 271 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 NSMCE3Q96MG7 304 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 SMIM14Q96QK8 99 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TTLL2Q9BWV7 592 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 IL22Q9GZX6 179 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 DONSONQ9NYP3 566 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 TXNDC16Q9P2K2 825 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 SOX13Q9UN79 622 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 HBS1LQ9Y450 684 aaKnown RBP14.62□□□□□ -0.07
CHD3-211ENST00000481999 CEP290O15078 2479 aa14.62□□□□□ -0.07
CHD3-211ENST00000481999 ABLIM3O94929 683 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 GSRP00390 522 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 KITP10721 976 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 ATP6V1C1P21283 382 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 GABRB3P28472 473 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 AVPR1AP37288 418 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 PSEN1P49768 467 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 AQP5P55064 265 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 STX3Q13277 289 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 NAB1Q13506 487 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 PTPRCAPQ14761 206 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 KPNB1Q14974 876 aaKnown RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 TBCCQ15814 346 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 CCDC6Q16204 474 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 N4BP2L1Q5TBK1 243 aaPredicted RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 MARC1Q5VT66 337 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 SPRED2Q7Z698 418 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 TMPRSS6Q8IU80 811 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 ZNF558Q96NG5 402 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 SIKE1Q9BRV8 207 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 NAT9Q9BTE0 207 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 SEZ6LQ9BYH1 1024 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 TRPC7Q9HCX4 862 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 OLA1Q9NTK5 396 aaKnown RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 THAP1Q9NVV9 213 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 DNMT3LQ9UJW3 386 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 ANAPC1Q9H1A4 1944 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 ERI2A8K979 691 aaKnown RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 WASH4PA8MWX3 477 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 PRRG1O14668 218 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 GJA1P17302 382 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 CORO1AP31146 461 aaKnown RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 PGM1P36871 562 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 GJA8P48165 433 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 HSF5Q4G112 596 aaPredicted RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 SPATA6LQ8N4H0 392 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 PPP1R14CQ8TAE6 165 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 STMN2Q93045 179 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 YME1L1Q96TA2 773 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 ZNF334Q9HCZ1 680 aaPredicted RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 SNX15Q9NRS6 342 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 TMEM216Q9P0N5 145 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 AFF4Q9UHB7 1163 aaKnown RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 AAR2Q9Y312 384 aaKnown RBP14.61□□□□□ -0.07
CHD3-211ENST00000481999 KCTD3Q9Y597 815 aa14.61□□□□□ -0.07
CHD3-211ENST00000481999 TEX28O15482 410 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 MAGEC1O60732 1142 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 STC2O76061 302 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 TYK2P29597 1187 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 GP5P40197 560 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 TUFMP49411 452 aaKnown RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 DSG1Q02413 1049 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms