RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 CCR1P32246 355 aa20.58■□□□□ 0.89
APP-215ENST00000474136 PRKCIP41743 596 aa20.58■□□□□ 0.89
APP-215ENST00000474136 PTK2Q05397 1052 aa20.58■□□□□ 0.89
APP-215ENST00000474136 SRSF1Q07955 248 aaKnown RBP eCLIP20.58■□□□□ 0.89
APP-215ENST00000474136 CCDC15Q0P6D6 951 aa20.58■□□□□ 0.89
APP-215ENST00000474136 LINC00303Q3SY05 128 aa20.58■□□□□ 0.89
APP-215ENST00000474136 KYAT3Q6YP21 454 aaKnown RBP20.58■□□□□ 0.89
APP-215ENST00000474136 CLEC14AQ86T13 490 aa20.58■□□□□ 0.89
APP-215ENST00000474136 TMEM110Q86TL2 294 aa20.58■□□□□ 0.89
APP-215ENST00000474136 PARGQ86W56 976 aa20.58■□□□□ 0.89
APP-215ENST00000474136 DCP2Q8IU60 420 aaKnown RBP20.58■□□□□ 0.89
APP-215ENST00000474136 DEFB106AQ8N104 65 aa20.58■□□□□ 0.89
APP-215ENST00000474136 ARL14Q8N4G2 192 aa20.58■□□□□ 0.89
APP-215ENST00000474136 LMX1AQ8TE12 382 aa20.58■□□□□ 0.89
APP-215ENST00000474136 GRAMD1AQ96CP6 724 aa20.58■□□□□ 0.89
APP-215ENST00000474136 CCNL2Q96S94 520 aaPredicted RBP20.58■□□□□ 0.89
APP-215ENST00000474136 SLC17A9Q9BYT1 436 aa20.58■□□□□ 0.89
APP-215ENST00000474136 TNKS2Q9H2K2 1166 aa20.58■□□□□ 0.89
APP-215ENST00000474136 HS3ST4Q9Y661 456 aa20.58■□□□□ 0.89
APP-215ENST00000474136 CSNK1G3Q9Y6M4 447 aa20.58■□□□□ 0.89
APP-215ENST00000474136 SPINT1O43278 529 aa20.57■□□□□ 0.88
APP-215ENST00000474136 CNTN5O94779 1100 aa20.57■□□□□ 0.88
APP-215ENST00000474136 PRNPP04156 253 aa20.57■□□□□ 0.88
APP-215ENST00000474136 SLC2A3P11169 496 aa20.57■□□□□ 0.88
APP-215ENST00000474136 KRT5P13647 590 aa20.57■□□□□ 0.88
APP-215ENST00000474136 USP8P40818 1118 aa20.57■□□□□ 0.88
APP-215ENST00000474136 PDX1P52945 283 aa20.57■□□□□ 0.88
APP-215ENST00000474136 KLHL30Q0D2K2 578 aa20.57■□□□□ 0.88
APP-215ENST00000474136 SRSF6Q13247 344 aaKnown RBP20.57■□□□□ 0.88
APP-215ENST00000474136 NR0B2Q15466 257 aa20.57■□□□□ 0.88
APP-215ENST00000474136 C6orf132Q5T0Z8 1188 aa20.57■□□□□ 0.88
APP-215ENST00000474136 LINGO4Q6UY18 593 aa20.57■□□□□ 0.88
APP-215ENST00000474136 VPS36Q86VN1 386 aa20.57■□□□□ 0.88
APP-215ENST00000474136 WDR36Q8NI36 951 aaKnown RBP20.57■□□□□ 0.88
APP-215ENST00000474136 STK32AQ8WU08 396 aa20.57■□□□□ 0.88
APP-215ENST00000474136 HDAC8Q9BY41 377 aa20.57■□□□□ 0.88
APP-215ENST00000474136 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.57■□□□□ 0.88
APP-215ENST00000474136 VPS51Q9UID3 782 aa20.57■□□□□ 0.88
APP-215ENST00000474136 SALL4Q9UJQ4 1053 aa20.57■□□□□ 0.88
APP-215ENST00000474136 AJAP1Q9UKB5 411 aaPredicted RBP20.57■□□□□ 0.88
APP-215ENST00000474136 TBC1D30Q9Y2I9 924 aa20.57■□□□□ 0.88
APP-215ENST00000474136 RP1P56715 2156 aa20.57■□□□□ 0.88
APP-215ENST00000474136 H3BM21 787 aa20.56■□□□□ 0.88
APP-215ENST00000474136 CLDN11O75508 207 aa20.56■□□□□ 0.88
APP-215ENST00000474136 GFPT2O94808 682 aa20.56■□□□□ 0.88
APP-215ENST00000474136 ENDOD1O94919 500 aa20.56■□□□□ 0.88
APP-215ENST00000474136 JUNDP17535 347 aa20.56■□□□□ 0.88
APP-215ENST00000474136 PDE1CQ14123 709 aaPredicted RBP20.56■□□□□ 0.88
APP-215ENST00000474136 IRF2BP2Q7Z5L9 587 aa20.56■□□□□ 0.88
APP-215ENST00000474136 CCDC170Q8IYT3 715 aa20.56■□□□□ 0.88
APP-215ENST00000474136 RBFAQ8N0V3 343 aa20.56■□□□□ 0.88
APP-215ENST00000474136 TPCN2Q8NHX9 752 aa20.56■□□□□ 0.88
APP-215ENST00000474136 FAM174AQ8TBP5 190 aa20.56■□□□□ 0.88
APP-215ENST00000474136 CCDC114Q96M63 670 aa20.56■□□□□ 0.88
APP-215ENST00000474136 TCEAL2Q9H3H9 227 aaPredicted RBP20.56■□□□□ 0.88
APP-215ENST00000474136 SYNDIG1Q9H7V2 258 aa20.56■□□□□ 0.88
APP-215ENST00000474136 ACP6Q9NPH0 428 aa20.56■□□□□ 0.88
APP-215ENST00000474136 IL36AQ9UHA7 158 aa20.56■□□□□ 0.88
APP-215ENST00000474136 IPO11Q9UI26 975 aaKnown RBP20.56■□□□□ 0.88
APP-215ENST00000474136 SSU72P8A0A1W2PR75 194 aa20.55■□□□□ 0.88
APP-215ENST00000474136 TERTO14746 1132 aaKnown RBP20.55■□□□□ 0.88
APP-215ENST00000474136 PAGE1O75459 146 aa20.55■□□□□ 0.88
APP-215ENST00000474136 LEFTY1O75610 366 aa20.55■□□□□ 0.88
APP-215ENST00000474136 TCEA3O75764 348 aa20.55■□□□□ 0.88
APP-215ENST00000474136 GRAP2O75791 330 aa20.55■□□□□ 0.88
APP-215ENST00000474136 RPS21P63220 83 aaKnown RBP20.55■□□□□ 0.88
APP-215ENST00000474136 KRT83P78385 493 aa20.55■□□□□ 0.88
APP-215ENST00000474136 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
APP-215ENST00000474136 EIF2B5Q13144 721 aaKnown RBP20.55■□□□□ 0.88
APP-215ENST00000474136 C1orf61Q13536 156 aa20.55■□□□□ 0.88
APP-215ENST00000474136 ALFQ53S48 1182 aa20.55■□□□□ 0.88
APP-215ENST00000474136 DPY19L3Q6ZPD9 716 aa20.55■□□□□ 0.88
APP-215ENST00000474136 ZNF677Q86XU0 584 aa20.55■□□□□ 0.88
APP-215ENST00000474136 SLC35F3Q8IY50 421 aa20.55■□□□□ 0.88
APP-215ENST00000474136 SLC2A13Q96QE2 648 aa20.55■□□□□ 0.88
APP-215ENST00000474136 IL12RB2Q99665 862 aa20.55■□□□□ 0.88
APP-215ENST00000474136 SIK2Q9H0K1 926 aa20.55■□□□□ 0.88
APP-215ENST00000474136 NCKIPSDQ9NZQ3 722 aa20.55■□□□□ 0.88
APP-215ENST00000474136 ATXN7L1Q9ULK2 861 aaPredicted RBP20.55■□□□□ 0.88
APP-215ENST00000474136 WASF2Q9Y6W5 498 aa20.55■□□□□ 0.88
APP-215ENST00000474136 BSNQ9UPA5 3926 aa20.55■□□□□ 0.88
APP-215ENST00000474136 TRPM6Q9BX84 2022 aa20.55■□□□□ 0.88
APP-215ENST00000474136 CCDC187A0A096LP49 1063 aa20.54■□□□□ 0.88
APP-215ENST00000474136 A0A0D9SEW6 157 aa20.54■□□□□ 0.88
APP-215ENST00000474136 GCATO75600 419 aa20.54■□□□□ 0.88
APP-215ENST00000474136 RHOCP08134 193 aa20.54■□□□□ 0.88
APP-215ENST00000474136 RABIFP47224 123 aa20.54■□□□□ 0.88
APP-215ENST00000474136 NEK3P51956 506 aa20.54■□□□□ 0.88
APP-215ENST00000474136 CDH4P55283 916 aa20.54■□□□□ 0.88
APP-215ENST00000474136 NME3Q13232 169 aa20.54■□□□□ 0.88
APP-215ENST00000474136 PDCLQ13371 301 aa20.54■□□□□ 0.88
APP-215ENST00000474136 TGIF1Q15583 401 aa20.54■□□□□ 0.88
APP-215ENST00000474136 TDRD12Q587J7 1177 aaKnown RBP20.54■□□□□ 0.88
APP-215ENST00000474136 COLEC12Q5KU26 742 aa20.54■□□□□ 0.88
APP-215ENST00000474136 C22orf39Q6P5X5 142 aa20.54■□□□□ 0.88
APP-215ENST00000474136 WDR59Q6PJI9 974 aa20.54■□□□□ 0.88
APP-215ENST00000474136 EXTL1Q92935 676 aa20.54■□□□□ 0.88
APP-215ENST00000474136 CCDC42Q96M95 316 aa20.54■□□□□ 0.88
APP-215ENST00000474136 KLF6Q99612 283 aaPredicted RBP20.54■□□□□ 0.88
APP-215ENST00000474136 C2orf49Q9BVC5 232 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms