RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CCDC6Q16204 474 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 PCID2Q5JVF3 399 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 OR6P1Q8NGX9 317 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 CFAP61Q8NHU2 1237 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 FCRL5Q96RD9 977 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 HAPLN3Q96S86 360 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 MCMBPQ9BTE3 642 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 DSEQ9UL01 958 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 VWA8A3KMH1 1905 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 A0A1W2PQ45 241 aaPredicted RBP14.97□□□□□ -0.01
SF1-211ENST00000448404 A0A1W2PQY0 241 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 KLHL33A6NCF5 533 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 ADRA1AP35348 466 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 CFAP157Q5JU67 520 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 TSTD2Q5T7W7 516 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 RNF180Q86T96 592 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 NSMCE3Q96MG7 304 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 CATSPERBQ9H7T0 1116 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 STARD7Q9NQZ5 370 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 MYO7AQ13402 2215 aa14.97□□□□□ -0.01
SF1-211ENST00000448404 DLX3O60479 287 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 BAG2O95816 211 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 IL1BP01584 269 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 CPOXP36551 454 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 SLC11A1P49279 550 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 CCL23P55773 120 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 NXNQ6DKJ4 435 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 RANBP10Q6VN20 620 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 KBTBD2Q8IY47 623 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 HEXDCQ8WVB3 486 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 PYDC1Q8WXC3 89 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 PHF21BQ96EK2 531 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 GPR22Q99680 433 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 MARCH2Q9P0N8 246 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 UXTQ9UBK9 157 aaPredicted RBP14.96□□□□□ -0.01
SF1-211ENST00000448404 TCAF1Q9Y4C2 921 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 PTPRDP23468 1912 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 MYO16Q9Y6X6 1858 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 ANKRD12Q6UB98 2062 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 MTSS1O43312 755 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 TRIM13O60858 407 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 ANO4Q32M45 955 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 NADSYN1Q6IA69 706 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 FAM117BQ6P1L5 589 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 ABI1Q8IZP0 508 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 ANKRD49Q8WVL7 239 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 RHOJQ9H4E5 214 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 SP110Q9HB58 689 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 NMRK1Q9NWW6 199 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 PPM1HQ9ULR3 514 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 ARL5AQ9Y689 179 aa14.96□□□□□ -0.01
SF1-211ENST00000448404 PSMG1O95456 288 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 MMP2P08253 660 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 CUL3Q13618 768 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 MAPRE1Q15691 268 aaKnown RBP14.96□□□□□ -0.02
SF1-211ENST00000448404 BRMS1LQ5PSV4 323 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 C1orf146Q5VVC0 180 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 MON1AQ86VX9 555 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 HPS6Q86YV9 775 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 SCUBE1Q8IWY4 988 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 RYBPQ8N488 228 aaPredicted RBP14.96□□□□□ -0.02
SF1-211ENST00000448404 PCSK9Q8NBP7 692 aaKnown RBP14.96□□□□□ -0.02
SF1-211ENST00000448404 TXNDC5Q8NBS9 432 aaKnown RBP14.96□□□□□ -0.02
SF1-211ENST00000448404 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.02
SF1-211ENST00000448404 OR7D4Q8NG98 312 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 RAET1EQ8TD07 263 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 BLOC1S5Q8TDH9 187 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 SH3TC2Q8TF17 1288 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 SLC39A13Q96H72 371 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 SLC45A3Q96JT2 553 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 CATSPER2Q96P56 530 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 VAT1Q99536 393 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 GKN1Q9NS71 199 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 MARCH5Q9NX47 278 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 FBXO5Q9UKT4 447 aa14.96□□□□□ -0.02
SF1-211ENST00000448404 AAR2Q9Y312 384 aaKnown RBP14.96□□□□□ -0.02
SF1-211ENST00000448404 OAZ2O95190 189 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 GJB5O95377 273 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 TYMPP19971 482 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 KCNC1P48547 511 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 RPS24P62847 133 aaKnown RBP14.95□□□□□ -0.02
SF1-211ENST00000448404 SNX30Q5VWJ9 437 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 ISLR2Q6UXK2 745 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 LSMEM2Q8N112 164 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 HDAC10Q969S8 669 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 WBP2Q969T9 261 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 SERPINB11Q96P15 392 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 TSGA13Q96PP4 275 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 LENG8Q96PV6 779 aaPredicted RBP14.95□□□□□ -0.02
SF1-211ENST00000448404 CDH19Q9H159 772 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 OXSMQ9NWU1 459 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 ADAM28Q9UKQ2 775 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 PCDHB5Q9Y5E4 795 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 PCDHB12Q9Y5F1 795 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 CDY1Q9Y6F8 540 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 A0A088AWK7 358 aa14.95□□□□□ -0.02
SF1-211ENST00000448404 ERI2A8K979 691 aaKnown RBP14.95□□□□□ -0.02
SF1-211ENST00000448404 AIM2O14862 343 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms