RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PILRAQ9UKJ1 303 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 DCHS2Q6V1P9 2916 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 M0QYT0 321 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 TOR1BO14657 336 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 B4GAT1O43505 415 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 RAD1O60671 282 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 FBXO21O94952 628 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 APOEP02649 317 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 VDRP11473 427 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 EIF4A3P38919 411 aaKnown RBP13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 ABL2P42684 1182 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 BLKP51451 505 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 CLCN6P51797 869 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 SGCGQ13326 291 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 HLTFQ14527 1009 aaKnown RBP eCLIP13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 ALG11Q2TAA5 492 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 DEFB109BQ30KR1 87 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 PHF19Q5T6S3 580 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 C22orf39Q6P5X5 142 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 TEX19Q8NA77 164 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 RNF34Q969K3 372 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 MBNL1Q9NR56 388 aaKnown RBP13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 VPS51Q9UID3 782 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 KCNMB2Q9Y691 235 aa13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 ARHGEF17Q96PE2 2063 aaPredicted RBP13.9□□□□□ -0.18
VCPKMT-201ENST00000395859 LOC101059948A0A1B0GTJ6 334 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 LDLRP01130 860 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 PDGFAP04085 211 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 PRKAR1AP10644 381 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 GTF2H1P32780 548 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 CUL4BQ13620 913 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 NFIL3Q16649 462 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 RABGAP1LQ5R372 815 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 CEP135Q66GS9 1140 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 KRT39Q6A163 491 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 FAM114A1Q8IWE2 563 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 CCDC150Q8NCX0 1101 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 CPT1CQ8TCG5 803 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 DHX58Q96C10 678 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 TCTN2Q96GX1 697 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 RBM15Q96T37 977 aaKnown RBP eCLIP13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 TNKS2Q9H2K2 1166 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 RAB20Q9NX57 234 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 TRAF3IP3Q9Y228 551 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 MAP4K5Q9Y4K4 846 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 CCDC168Q8NDH2 2452 aa13.89□□□□□ -0.19
VCPKMT-201ENST00000395859 IGHV5-10-1A0A0J9YXX1 117 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 EFCAB7A8K855 629 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 AREL1O15033 823 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 NUDT21O43809 227 aaKnown RBP13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 CPNE6O95741 557 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 TRUB2O95900 331 aaKnown RBP13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 PEX5P50542 639 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 NUCB2P80303 420 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 NR1D2Q14995 579 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 CLPPQ16740 277 aaPredicted RBP13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 ZNF438Q7Z4V0 828 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 GKN2Q86XP6 184 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 CCDC13Q8IYE1 715 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 IQUBQ8NA54 791 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 RCBTB1Q8NDN9 531 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 TSACCQ96A04 125 aaPredicted RBP13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 MAGEF1Q9HAY2 307 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 RDH14Q9HBH5 336 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 KIAA1257Q9ULG3 409 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 DOLKQ9UPQ8 538 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 ITM2BQ9Y287 266 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 FRMD4BQ9Y2L6 1034 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 NIPBLQ6KC79 2804 aaeCLIP13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 NAV3Q8IVL0 2385 aa13.88□□□□□ -0.19
VCPKMT-201ENST00000395859 CLDN11O75508 207 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 PRF1P14222 555 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 CD19P15391 556 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 KRT83P78385 493 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 CUL2Q13617 745 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 AUHQ13825 339 aaKnown RBP13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 C14orf28Q4W4Y0 310 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 ARTNQ5T4W7 220 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 ATP1A1-AS1Q5TC04 95 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 ASB18Q6ZVZ8 466 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 C17orf82Q86X59 251 aaPredicted RBP13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 HID1Q8IV36 788 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 BMPERQ8N8U9 685 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 ATP6V0D2Q8N8Y2 350 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 DCAF4L2Q8NA75 395 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 RAB7BQ96AH8 199 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 NUDT22Q9BRQ3 303 aa13.87□□□□□ -0.19
VCPKMT-201ENST00000395859 C2orf49Q9BVC5 232 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms