RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 JAK1P23458 1154 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TCF7P36402 384 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 GRIA1P42261 906 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 HCAR3P49019 387 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 GABARAPL2P60520 117 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 RBP5P82980 135 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 NFATC3Q12968 1075 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 FASTKQ14296 549 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 RAB39AQ14964 217 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 STXBP2Q15833 593 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZYXQ15942 572 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 AASDHQ4L235 1098 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 C6orf10Q5SRN2 563 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SH3PXD2AQ5TCZ1 1133 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 LRRC8EQ6NSJ5 796 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 CMC1Q7Z7K0 106 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 KCNMB4Q86W47 210 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TRIM50Q86XT4 487 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SLC22A9Q8IVM8 553 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TBC1D21Q8IYX1 336 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TNS4Q8IZW8 715 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 SFRP1Q8N474 314 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 C1orf127Q8N9H9 656 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PPWD1Q96BP3 646 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF669Q96BR6 464 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF512Q96ME7 567 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 KCTD15Q96SI1 283 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 DHX35Q9H5Z1 703 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 HMG20AQ9NP66 347 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 INTS10Q9NVR2 710 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 KIAA1522Q9P206 1035 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF639Q9UID6 485 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TSPAN16Q9UKR8 245 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 PSME2Q9UL46 239 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 CLEC11AQ9Y240 323 aa8.3□□□□□ -1.08
PTPRR-203ENST00000378778 TDRKHQ9Y2W6 561 aaKnown RBP8.3□□□□□ -1.08
PTPRR-203ENST00000378778 CLOCKO15516 846 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 PFKMP08237 780 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TGFB3P10600 412 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF24P17028 368 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 STX1BP61266 288 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TOP3AQ13472 1001 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 CA9Q16790 459 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 CDO1Q16878 200 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 PPP6R3Q5H9R7 873 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 DEPDC1Q5TB30 811 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ZBTB33Q86T24 672 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 FLAD1Q8NFF5 587 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 SLC35F5Q8WV83 523 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 OSCP1Q8WVF1 389 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 KHSRPQ92945 711 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 P2RY11Q96G91 374 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 SLC9A7Q96T83 725 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 NPAS2Q99743 824 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 CIB1Q99828 191 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 NOL11Q9H8H0 719 aaKnown RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ANKHQ9HCJ1 492 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 PRMT7Q9NVM4 692 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 SMOXQ9NWM0 555 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 SMPD3Q9NY59 655 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 DERAQ9Y315 318 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TCAF1Q9Y4C2 921 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 A0A0G2JMZ2 1700 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 LRRC37A2A6NM11 1700 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 MYOCOSA0A1B0GUC4 107 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 DHRS12A0PJE2 317 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 K7EPI3 171 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 NEMP1O14524 444 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 GPC4O75487 556 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ITGBL1O95965 494 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 LTFP02788 710 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 FUCA1P04066 466 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 CHRNGP07510 517 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 MBL2P11226 248 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 MAP4P27816 1152 aaKnown RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 GABRB3P28472 473 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 SLC26A3P40879 764 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 CCT8P50990 548 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 NAGLUP54802 743 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 OCA2Q04671 838 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 LAMTOR4Q0VGL1 99 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 GRIK2Q13002 908 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 NR1D2Q14995 579 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 OXA1LQ15070 435 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 GOLGA7BQ2TAP0 167 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 AARS2Q5JTZ9 985 aaKnown RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 BROXQ5VW32 411 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 KCTD11Q693B1 232 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TMEM53Q6P2H8 277 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 PAOXQ6QHF9 649 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 PRR23BQ6ZRT6 265 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 FASTKD5Q7L8L6 764 aaKnown RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TRMT1LQ7Z2T5 733 aaKnown RBP8.29□□□□□ -1.08
PTPRR-203ENST00000378778 TFAP2DQ7Z6R9 452 aa8.29□□□□□ -1.08
PTPRR-203ENST00000378778 ZC3HC1Q86WB0 502 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms