RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 RFTN1Q14699 578 aaPredicted RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 TGFBIQ15582 683 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 C6orf10Q5SRN2 563 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 FKBP1CQ5VVH2 108 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 GPR141Q7Z602 305 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 FSTL5Q8N475 847 aaPredicted RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 DNAAF3Q8N9W5 541 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 KDM1BQ8NB78 822 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 SUN5Q8TC36 379 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 CYP3A43Q9HB55 503 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 EIF2B3Q9NR50 452 aaKnown RBP11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 UBP1Q9NZI7 540 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 CCDC167Q9P0B6 97 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ZNHIT2Q9UHR6 403 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ADAM28Q9UKQ2 775 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 VANGL2Q9ULK5 521 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PSME4Q14997 1843 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 NEMP2A6NFY4 417 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 TRIM24O15164 1050 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 MT-CO1P00395 513 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 NMBRP28336 390 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 GRM5P41594 1212 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 BACE1P56817 501 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PRKAA1Q13131 559 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 HSDL1Q3SXM5 330 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PRAMEF18Q5VWM3 479 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 CNSTQ6PJW8 725 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ZBTB49Q6ZSB9 765 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 KCNMB4Q86W47 210 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 NT5DC4Q86YG4 428 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC41A1Q8IVJ1 513 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 CNTD1Q8N815 330 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ERLEC1Q96DZ1 483 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ANKRD60Q9BZ19 345 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 ABCG4Q9H172 646 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 SMOXQ9NWM0 555 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 PHIPQ8WWQ0 1821 aa11.63□□□□□ -0.55
TM9SF2-201ENST00000376387 A0A1W2PPW3 197 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 KANSL1LA0AUZ9 987 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 IL18RAPO95256 599 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 BMP10O95393 424 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 NFKBIAP25963 317 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 ICAM3P32942 547 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 YBX1P67809 324 aaKnown RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 EIF2B5Q13144 721 aaKnown RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 HERC3Q15034 1050 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 FGD3Q5JSP0 725 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 REP15Q6BDI9 236 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 SETD3Q86TU7 594 aaPredicted RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 TMEM135Q86UB9 458 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 CENPLQ8N0S6 344 aaPredicted RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 ANKK1Q8NFD2 765 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 OR9I1Q8NGQ6 314 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 CENPIQ92674 756 aaPredicted RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 UROC1Q96N76 676 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 MCMBPQ9BTE3 642 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 IL22Q9GZX6 179 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 OSBPL2Q9H1P3 480 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 LRRC40Q9H9A6 602 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 CACNA2D2Q9NY47 1150 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 IGSF9Q9P2J2 1179 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 XPR1Q9UBH6 696 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 TUBGCP4Q9UGJ1 667 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC35E2BP0CK96 405 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 TCF3P15923 654 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 PMS2P3Q13401 168 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 MXD4Q14582 209 aaPredicted RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 CHST15Q7LFX5 561 aaPredicted RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 MFSD6LQ8IWD5 586 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 CANT1Q8WVQ1 401 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 TFAP2CQ92754 450 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 NAT9Q9BTE0 207 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 KCTD5Q9NXV2 234 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 HOXC10Q9NYD6 342 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 SUCOQ9UBS9 1254 aaKnown RBP11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC8A2Q9UPR5 921 aa11.62□□□□□ -0.55
TM9SF2-201ENST00000376387 SGTAO43765 313 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ARIH2O95376 493 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ADORA2BP29275 332 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 RXRGP48443 463 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 SIM2Q14190 667 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 GPR107Q5VW38 600 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 CROCCP3Q8IVE0 287 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 CEP97Q8IW35 865 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ZNF280CQ8ND82 737 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ANKRD49Q8WVL7 239 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TANKQ92844 425 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 NXNL1Q96CM4 212 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TEX13BQ9BXU2 312 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 R3HDMLQ9H3Y0 253 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 VRTNQ9H8Y1 702 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TBCCD1Q9NVR7 557 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 KLHL8Q9P2G9 620 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 SQORQ9Y6N5 450 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TCRBV3S1A0A5B6 114 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms