RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MRPL46Q9H2W6 279 aaKnown RBP12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 FZD10Q9ULW2 581 aa12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.4
CHMP2B-201ENST00000263780 SAC3D1A6NKF1 404 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 SULT1C4O75897 302 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 MMP10P09238 476 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 PSMA4P25789 261 aaKnown RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 MAP4P27816 1152 aaKnown RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 GRIA3P42263 894 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 ACADSBP45954 432 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 RALGDSQ12967 914 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 PAFAH1B3Q15102 231 aaKnown RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 C6orf10Q5SRN2 563 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 TREML2Q5T2D2 321 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 ANKRD26P1Q6NSI1 321 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 NANOGP8Q6NSW7 305 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 ZC3HC1Q86WB0 502 aaKnown RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 NT5DC4Q86YG4 428 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 SPPL2BQ8TCT7 592 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 CANT1Q8WVQ1 401 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 FEM1CQ96JP0 617 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 MRPL57Q9BQC6 102 aaKnown RBP12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 NEURL2Q9BR09 285 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 BRD8Q9H0E9 1235 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 MEAF6Q9HAF1 191 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 USP21Q9UK80 565 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 ERGIC3Q9Y282 383 aa12.52□□□□□ -0.41
CHMP2B-201ENST00000263780 IGKV6-21A0A0C4DH24 114 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 A0A1W2PPW3 197 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 K7EPI3 171 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 NCAM2O15394 837 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 PSMD3O43242 534 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 FUCA1P04066 466 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 JUNP05412 331 aaKnown RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 ATP5F1P24539 256 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 STX1BP61266 288 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 TUBA3CQ13748 450 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 NR1D2Q14995 579 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 C8orf82Q6P1X6 216 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CCDC185Q8N715 623 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 SCAIQ8N9R8 606 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 KCTD4Q8WVF5 259 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 PRMT7Q9NVM4 692 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 TRHDEQ9UKU6 1024 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 HES2Q9Y543 173 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 DOCK5Q9H7D0 1870 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 DHRS12A0PJE2 317 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CAPN15O75808 1086 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 FARP2O94887 1054 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 BCL10O95999 233 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 MYL3P08590 195 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 LRPAP1P30533 357 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CAPGP40121 348 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 BMXP51813 675 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 RAB10P61026 200 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 ATP6V0D1P61421 351 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CTBSQ01459 385 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 DGKZQ13574 1117 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 SNX17Q15036 470 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 KCTD8Q6ZWB6 473 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CCDC80Q76M96 950 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 RNF139Q8WU17 664 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CYGBQ8WWM9 190 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CCDC138Q96M89 665 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CORO1BQ9BR76 489 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 AGPAT4Q9NRZ5 378 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 GIN1Q9NXP7 522 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 CCDC167Q9P0B6 97 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 XPR1Q9UBH6 696 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 DOLKQ9UPQ8 538 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 MFHAS1Q9Y4C4 1052 aa12.51□□□□□ -0.41
CHMP2B-201ENST00000263780 A0A087X1B8 175 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 RASAL1O95294 804 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 EIF2S1P05198 315 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC35E2BP0CK96 405 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 STMN1P16949 149 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SAT1P21673 171 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GABRB3P28472 473 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 ABCG1P45844 678 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GLRBP48167 497 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 NFATC3Q12968 1075 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 ATP1A4Q13733 1029 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 ATP6AP1Q15904 470 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 FGD3Q5JSP0 725 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 EGFLAMQ63HQ2 1017 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms