RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Snx21Q3UR97 363 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Abcd2Q61285 741 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Fstl5Q8BFR2 847 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Noc4lQ8BHY2 516 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Oas1dQ8VI95 361 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pcdha6Q91Y14 946 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Dnajc3Q91YW3 504 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tex9Q9D845 387 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Il20Q9JKV9 176 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Actl7bQ9QY83 418 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Lama2Q60675 3118 aaKnown RBP16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Akap5D3YVF0 745 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 9230113P08RikD3YWX3 137 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Olfr414E9Q5P8 317 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 ItgavP43406 1044 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Caprin2Q05A80 1031 aaKnown RBP16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Hsdl2Q2TPA8 490 aaKnown RBP16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cand2Q6ZQ73 1235 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Atg16l1Q8C0J2 607 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Psapl1Q8C1C1 522 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Znf426Q8R1D1 550 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Mccc1Q99MR8 717 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Dnajb2Q9QYI5 324 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nhsl2B1AXH1 854 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gm3187M0QWW3 260 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 NumblO08919 604 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Il12bP43432 335 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Serping1P97290 504 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Kcnc2Q14B80 642 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pcid2Q8BFV2 399 aaKnown RBP16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gbp5Q8CFB4 590 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 ChiaQ91XA9 473 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 RlfA2A7F4 1918 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zc3h7aE9PWW6 970 aaKnown RBP16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 KlO35082 1014 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Thumpd3P97770 505 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 ItkQ03526 625 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Mtnr1aQ61184 353 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Efr3bQ6ZQ18 817 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Slc16a9Q7TM99 508 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 FsbpQ8BKE5 299 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Trim14Q8BVW3 440 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gfm2Q8R2Q4 779 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Imp4Q8VHZ7 291 aaKnown RBP16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Glra3Q91XP5 464 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tcaf2Q921K8 919 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 Prl5a1Q9JII2 230 aa16.07■□□□□ 0.16
Trim39-203ENSMUST00000113706 AvilO88398 819 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Hmgb4Q6P8W9 181 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Dusp16Q6PCP3 660 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zfp398Q8BV16 643 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Slco6c1Q8C0X7 706 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pnpla8Q8K1N1 776 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 RhoqQ8R527 205 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ttc39cQ8VE09 580 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Olfr1353Q8VGU8 309 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Adam33Q923W9 797 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nme5Q99MH5 211 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Slc29a1Q9JIM1 460 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cyp3a41aQ9JMA7 504 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gm3259D3YUK0 475 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Wdr5P61965 334 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Neurog1P70660 244 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Trim68Q8K243 485 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pde6cQ91ZQ1 861 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cdc26Q99JP4 85 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Homer3Q99JP6 356 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cab39lQ9DB16 337 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Il1rl2Q9ERS7 574 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gm8257E9Q8R3 264 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nrg3O35181 713 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 ChgbP16014 677 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Mapkapk2P49138 386 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pitx1P70314 315 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Lypla1P97823 230 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Myadml2Q08AU7 307 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Meaf6Q2VPQ9 191 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Fam189bQ5HZJ5 669 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 CcncQ62447 283 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Lingo3Q6GQU6 589 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Paqr6Q6TCG5 343 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rpp38Q80UU2 280 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zmpste24Q80W54 475 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Echs1Q8BH95 290 aaKnown RBP16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nod1Q8BHB0 953 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Snx15Q91WE1 337 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rex1bdQ9CYZ6 169 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 CinpQ9D0V8 212 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tmem68Q9D850 329 aa16.06■□□□□ 0.16
Trim39-203ENSMUST00000113706 MgamB5THE2 1827 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gm5930D3Z257 264 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Prkag1O54950 330 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rtn2O70622 471 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Adcy1O88444 1118 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 P01673 111 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tap1P21958 724 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gja8P28236 440 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 IqcmQ149I8 489 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cd300lgQ1ERP8 331 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Fam83fQ3UKU4 495 aa16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms