RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Ctla2bP12400 113 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Prdx3P20108 257 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Mapkapk2P49138 386 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Snrpd1P62315 119 aaKnown RBP11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Uap1l1Q3TW96 507 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Zyg11bQ3UFS0 744 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Tmem237Q3V0J1 427 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Zkscan4Q5SZT6 480 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Itih1Q61702 907 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Map3k10Q66L42 940 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Q80Y73 168 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 1700001C19RikQ8K168 210 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Hdac8Q8VH37 377 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Slc26a5Q99NH7 744 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Mcur1Q9CXD6 340 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Q9D5Y0 588 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Rabgef1Q9JM13 491 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Slc12a7Q9WVL3 1083 aa11.04□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Pkd1l2Q7TN88 2461 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Ttll11A4Q9F4 727 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Vmn2r11E9Q4X4 861 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Gm14496K7N5U4 849 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Bmp4P21275 408 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Lzts1P60853 599 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Fbxo40P62932 710 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Pou6f1Q07916 301 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Scrn3Q3TMH2 418 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Foxk2Q3UCQ1 651 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 HarsQ61035 509 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Usf1Q61069 310 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Il17reQ8BH06 637 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Ubxn4Q8VCH8 506 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 March8Q9DBD2 286 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Rpn2Q9DBG6 631 aaKnown RBP11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 CrotQ9DC50 612 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 MycbpQ9EQS3 103 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Lrp4Q8VI56 1905 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Gm4450E9Q007 373 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Zfp169E9Q3R6 731 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Zbtb10E9Q8X5 861 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Dpysl4O35098 572 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Klra1P20937 262 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Gna12P27600 379 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 CebpbP28033 296 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Col6a2Q02788 1034 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Tex52Q3TTI8 308 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Q3TTJ4 293 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Ubn1Q4G0F8 1135 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Hsd3b4Q61767 373 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Sorbs1Q62417 1290 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Luc7l2Q7TNC4 392 aaKnown RBP11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Pcdh19Q80TF3 1145 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Q8BGK9 164 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Hpcal4Q8BGZ1 191 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Glcci1Q8K3I9 537 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Nop14Q8R3N1 860 aaKnown RBP11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Cdt1Q8R4E9 557 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Gpn2Q8VEJ1 310 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Tubgcp2Q921G8 905 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Zfp61Q923D1 555 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Mrpl2Q9D773 306 aaKnown RBP11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 ApmapQ9D7N9 415 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Chmp2aQ9DB34 222 aa11.03□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Fer1l5P0DM40 2038 aa11.02□□□□□ -0.64
Ccdc60-202ENSMUST00000086483 Gm7792A0A0J9YU01 481 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Gm3183D3YUJ6 481 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Gm3298E9PW80 205 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Ptar1E9QAB6 424 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Gm3139J3QK78 481 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Gm3106J3QPH3 481 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Vmn2r67K7N6T2 851 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Prl2c3P04768 224 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Hoxa2P31245 372 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Fpr1P33766 364 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Ndst2P52850 883 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Gabrb2P63137 512 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Zfp607aQ3TQG9 686 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Tnks2Q3UES3 1166 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Erich4Q3UNU4 136 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Muc19Q6JHY2 733 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Hdac10Q6P3E7 666 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Gbp9Q8BTS3 619 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Efl1Q8C0D5 1127 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Spdye4bQ8CDE8 236 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Rfpl4aQ8VH31 287 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Clcc1Q99LI2 539 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 D730048I06RikQ9CQB8 106 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Anks3Q9CZK6 655 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Syce1Q9D495 329 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Piwil1Q9JMB7 862 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Chrna6Q9R0W9 494 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Bod1lE9Q6J5 3032 aa11.02□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Glyatl3E9Q5L8 290 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Spata31d1dE9Q5W2 1247 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Il13ra1O09030 424 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Cxcr2P35343 359 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Atf4Q06507 349 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Prickle1Q3U5C7 832 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 EgflamQ4VBE4 1017 aa11.01□□□□□ -0.65
Ccdc60-202ENSMUST00000086483 Slc5a10Q5SWY8 596 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms