RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SFMBT1Q9UHJ3 866 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SLC12A6Q9UHW9 1150 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SLCO3A1Q9UIG8 710 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 WASF2Q9Y6W5 498 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 GOLGA6L7A0A1B0GV03 622 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 CPED1A4D0V7 1026 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 H3BQV1 296 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 AREL1O15033 823 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 SPINT1O43278 529 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 CEACAM4O75871 244 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 CLDN1O95832 211 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 LDLRP01130 860 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 NR3C1P04150 777 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ANKRD34CP0C6C1 535 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 THRAP10827 490 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 IGFALSP35858 605 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 SCNN1AP37088 669 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 METAP1P53582 386 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 GEMIN4P57678 1058 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 MC2RQ01718 297 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 DLG2Q15700 870 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 CNGA2Q16280 664 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 DEFB133Q30KQ1 61 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 RFWD3Q6PCD5 774 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 CCDC13Q8IYE1 715 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 TATDN2Q93075 761 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 VOPP1Q96AW1 172 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ARHGEF26Q96DR7 871 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 PGAP3Q96FM1 320 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 C2orf49Q9BVC5 232 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 NUCKS1Q9H1E3 243 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 EPB41L1Q9H4G0 881 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 PISDQ9UG56 409 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 TSPAN16Q9UKR8 245 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 MFHAS1Q9Y4C4 1052 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 FLNBO75369 2602 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 VPS37CA5D8V6 355 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 RAD51BO15315 384 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 SLC16A3O15427 465 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 VPS4BO75351 444 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ZNF821O75541 412 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 GCATO75600 419 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 RHOBTB3O94955 611 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 BMP6P22004 513 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 STAT1P42224 750 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 STK19P49842 368 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 LIMK2P53671 638 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ADKP55263 362 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 RPS24P62847 133 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 SRSF6Q13247 344 aaKnown RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 MTM1Q13496 603 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 PDE1CQ14123 709 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 RABEP1Q15276 862 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ARTNQ5T4W7 220 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 SEL1L3Q68CR1 1132 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 KRT39Q6A163 491 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 FOXR2Q6PJQ5 311 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 LGI2Q8N0V4 545 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 IQUBQ8NA54 791 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 TTC13Q8NBP0 860 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 KIAA1143Q96AT1 154 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 C1orf74Q96LT6 269 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ARHGEF38Q9NXL2 777 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 KCTD5Q9NXV2 234 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 VPS4AQ9UN37 437 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 FRMD4BQ9Y2L6 1034 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.66□□□□□ -1.66
SNCA-213ENST00000618500 PTPN13Q12923 2485 aa4.66□□□□□ -1.66
SNCA-213ENST00000618500 PCM1Q15154 2024 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 MKRN2OSH3BPM6 223 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 MUSKO15146 869 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 MSI1O43347 362 aaKnown RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 KLRC4O43908 158 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 CUTAO60888 179 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 RFPL1O75677 317 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 CPNE6O95741 557 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 ZNF18P17022 549 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 PDCP20941 246 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 GJB2P29033 226 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 MAT2AP31153 395 aaKnown RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 STAT5AP42229 794 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 SERPINH1P50454 418 aaKnown RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 ARSDP51689 593 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 HK3P52790 923 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 DLG4P78352 724 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 PPARDQ03181 441 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 BRMS1LQ5PSV4 323 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 LYSMD3Q7Z3D4 306 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 TAC4Q86UU9 113 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 VASH2Q86V25 355 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 CACNA2D3Q8IZS8 1091 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 RBFAQ8N0V3 343 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 NLGN4XQ8N0W4 816 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 ZNF397Q8NF99 534 aaPredicted RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 NLGN4YQ8NFZ3 816 aaPredicted RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 IPO9Q96P70 1041 aaKnown RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 SLC4A5Q9BY07 1137 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 CYP4F12Q9HCS2 524 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 PPARGC1AQ9UBK2 798 aaKnown RBP4.65□□□□□ -1.66
SNCA-213ENST00000618500 RABGEF1Q9UJ41 708 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms