RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 TSC1Q92574 1164 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 CELF6Q96J87 481 aaKnown RBP8.56□□□□□ -1.04
TSC2-223ENST00000568566 RPL10LQ96L21 214 aaKnown RBP8.56□□□□□ -1.04
TSC2-223ENST00000568566 MRGPRX3Q96LB0 322 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 C1orf74Q96LT6 269 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
TSC2-223ENST00000568566 UVRAGQ9P2Y5 699 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 SLC12A6Q9UHW9 1150 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 GGA2Q9UJY4 613 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 INTUQ9ULD6 942 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 ALG6Q9Y672 507 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 CAPN6Q9Y6Q1 641 aa8.56□□□□□ -1.04
TSC2-223ENST00000568566 TTC34A8MYJ7 566 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 TK2O00142 265 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 SMAD6O43541 496 aaKnown RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 TLX3O43711 291 aaPredicted RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 PCDHGA12O60330 932 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 RNF8O76064 485 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 SEMA4FO95754 770 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 FTCDO95954 541 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 CD160O95971 181 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 ERCC2P18074 760 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PCK1P35558 622 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 EIF2S3P41091 472 aaKnown RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 EIF4HQ15056 248 aaKnown RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 INAVAQ3KP66 663 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 FNDC3BQ53EP0 1204 aaKnown RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 PITRM1Q5JRX3 1037 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 C6orf118Q5T5N4 469 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PPP1R2P3Q6NXS1 205 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 POLNQ7Z5Q5 900 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 ADAT2Q7Z6V5 191 aaKnown RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 TMPRSS12Q86WS5 348 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 GATAD2AQ86YP4 633 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 ZNF843Q8N446 348 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PQLC3Q8N755 202 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.55□□□□□ -1.04
TSC2-223ENST00000568566 LRRC57Q8N9N7 239 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 OR2T3Q8NH03 318 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PCDH19Q8TAB3 1148 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 ALG3Q92685 438 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 MYO19Q96H55 970 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 NSMCE3Q96MG7 304 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PPP1R9BQ96SB3 815 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 FEM1AQ9BSK4 669 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 ZYG11BQ9C0D3 744 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 SLC39A8Q9C0K1 460 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PCED1AQ9H1Q7 454 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PRORYQ9H606 182 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 ELOVL2Q9NXB9 296 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 TRMT1Q9NXH9 659 aaKnown RBP8.55□□□□□ -1.04
TSC2-223ENST00000568566 GUCA1BQ9UMX6 200 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PPP2R2CQ9Y2T4 447 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 COL6A6A6NMZ7 2263 aa8.55□□□□□ -1.04
TSC2-223ENST00000568566 PLXNA2O75051 1894 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 A0A1B0GVM2 712 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 TCAF2A6NFQ2 919 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 EEF2KO00418 725 aaKnown RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 ARHGAP6O43182 974 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 PALMO75781 387 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 ZMPSTE24O75844 475 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 CYBBP04839 570 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 KRT10P13645 584 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 JUPP14923 745 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 RHOQP17081 205 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 CD27P26842 260 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 EPHB2P29323 1055 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 HNF1BP35680 557 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 CTSKP43235 329 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 DNA2P51530 1060 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 METAP1P53582 386 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 HADHBP55084 474 aaKnown RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 CDH4P55283 916 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 CDH6P55285 790 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 SLC10A2Q12908 348 aaPredicted RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 DNAJC3Q13217 504 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 ZNF177Q13360 481 aaPredicted RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 DPYSQ14117 519 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 DPYSL3Q14195 570 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 PRAMEF14Q5SWL7 426 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 MFSD7Q6UXD7 560 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 NPNTQ6UXI9 565 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 RFX8Q6ZV50 586 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 ZNF605Q86T29 641 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 ARHGAP12Q8IWW6 846 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 VOPP1Q96AW1 172 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 BIRC7Q96CA5 298 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 TBC1D31Q96DN5 1066 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 HMCESQ96FZ2 354 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 CSPG4P5Q96PW8 444 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 DDX50Q9BQ39 737 aaKnown RBP8.54□□□□□ -1.04
TSC2-223ENST00000568566 SPON2Q9BUD6 331 aa8.54□□□□□ -1.04
TSC2-223ENST00000568566 LZTFL1Q9NQ48 299 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms