RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 ACTL7AQ9Y615 435 aa9.62□□□□□ -0.87
HNRNPC-223ENST00000556142 NUP205Q92621 2012 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 A0A1B0GVM2 712 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 LOC285095A0A1B0GVY8 99 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 TCAF2A6NFQ2 919 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 PRR33A8MZF0 331 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CCL16O15467 120 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ATP9BO43861 1147 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CLASP2O75122 1294 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ZMPSTE24O75844 475 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 POLBP06746 335 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CA3P07451 260 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 SNRPAP09012 282 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 GJA1P17302 382 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 KRT4P19013 534 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 NMBRP28336 390 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CDC25CP30307 473 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CA8P35219 290 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CCNFP41002 786 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 NEK3P51956 506 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 WNT3AP56704 352 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MAXP61244 160 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 DSC2Q02487 901 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MGAT5Q09328 741 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ZNF177Q13360 481 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 LRRC14Q15048 493 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CYTH1Q15438 398 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 SLC1A5Q15758 541 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 PCID2Q5JVF3 399 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 TMCO4Q5TGY1 634 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 RNF43Q68DV7 783 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 PKN3Q6P5Z2 889 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 FOXR1Q6PIV2 292 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ZNF783Q6ZMS7 281 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 LEKR1Q6ZMV7 388 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CTAGE3PQ8IX95 158 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CPXM2Q8N436 756 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MAB21L3Q8N8X9 362 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 IPMKQ8NFU5 416 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 BCAS4Q8TDM0 211 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MRPS31Q92665 395 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MFSD3Q96ES6 412 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ALG14Q96F25 216 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CERS2Q96G23 380 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 ZNF778Q96MU6 729 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 SMC6Q96SB8 1091 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CCT8L2Q96SF2 557 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MCMBPQ9BTE3 642 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 RABEP2Q9H5N1 569 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 CERS4Q9HA82 394 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 MRM3Q9HC36 420 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 VPS45Q9NRW7 570 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 SLC17A6Q9P2U8 582 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 DNMT3BQ9UBC3 853 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 PRKAG3Q9UGI9 489 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 GRID1Q9ULK0 1009 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 SMG5Q9UPR3 1016 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 OR51B4Q9Y5P0 310 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 RPS6KL1Q9Y6S9 549 aa9.61□□□□□ -0.87
HNRNPC-223ENST00000556142 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 TTC24A2A3L6 582 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 TRIM49D1C9J1S8 452 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 PMPCBO75439 489 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 GJB3O75712 270 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 FAM107AO95990 144 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 MT-ND3P03897 115 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ATXN1LP0C7T5 689 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ERVK-10P10266 1014 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 CR2P20023 1033 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 GLDCP23378 1020 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 HOXA9P31269 272 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 FOXN2P32314 431 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 RPA3P35244 121 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 CD86P42081 329 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 SERPINB9P50453 376 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ARF5P84085 180 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 SLC14A2Q15849 920 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 QPCTQ16769 361 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 FSCBQ5H9T9 825 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 PPM1LQ5SGD2 360 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 STXBP5Q5T5C0 1151 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 TEDDM1Q5T9Z0 273 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ARMC3Q5W041 872 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 PACS1Q6VY07 963 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ANKRD42Q8N9B4 389 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 SHKBP1Q8TBC3 707 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 MGARPQ8TDB4 240 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ZNF473Q8WTR7 871 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 NSMCE1Q8WV22 266 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 ZNF669Q96BR6 464 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 MTBPQ96DY7 904 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 SGSM3Q96HU1 749 aa9.6□□□□□ -0.87
HNRNPC-223ENST00000556142 RANBP9Q96S59 729 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms