RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ELMOD2Q8IZ81 293 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CENPSQ8N2Z9 138 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MOSPD2Q8NHP6 518 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MECRQ9BV79 373 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GTPBP2Q9BX10 602 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NIF3L1Q9GZT8 377 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 AP5M1Q9H0R1 490 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF302Q9NR11 478 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 HPSEQ9Y251 543 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 A0A0X1KG70 313 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ERVV-2B6SEH9 535 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TCEA3O75764 348 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PIAS1O75925 651 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PRKAR2AP13861 404 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TWF1Q12792 350 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZBED5Q49AG3 693 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 RC3H1Q5TC82 1133 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF517Q6ZMY9 492 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 EEF1AKMT1Q8WVE0 214 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 C1GALT1C1Q96EU7 318 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ERMAPQ96PL5 475 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CPNE1Q99829 537 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 RUSC1Q9BVN2 902 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 POMKQ9H5K3 350 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MORF4L1Q9UBU8 362 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 AP3M1Q9Y2T2 418 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ACTL7BQ9Y614 415 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 AP3D1O14617 1153 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PGRMC2O15173 223 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PEX14O75381 377 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 LYPLA1O75608 230 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NUDT17P0C025 328 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PRKACBP22694 351 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 R3HCC1LQ7Z5L2 792 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 THAP5Q7Z6K1 395 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MYO3AQ8NEV4 1616 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ACTRT2Q8TDY3 377 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PALLDQ8WX93 1383 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GATAD2BQ8WXI9 593 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CAMKK2Q96RR4 588 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 SPON1Q9HCB6 807 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CATSPERZQ9NTU4 200 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CRLS1Q9UJA2 301 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PEX16Q9Y5Y5 336 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ASB14A6NK59 587 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ASS1P00966 412 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 S100A3P33764 101 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MAPK12P53778 367 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NAB1Q13506 487 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 FIGNQ5HY92 759 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GRTP1Q5TC63 336 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 UBE2J2Q8N2K1 259 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TBC1D19Q8N5T2 526 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF540Q8NDQ6 660 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DNAJB14Q8TBM8 379 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DPY30Q9C005 99 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MAP10Q9P2G4 905 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ARHGAP28Q9P2N2 729 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 SLC17A7Q9P2U7 560 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 EGFL7Q9UHF1 273 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CDH22Q9UJ99 828 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZNFX1Q9P2E3 1918 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DENND4BO75064 1496 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 A0A0G2JLW4 131 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ZC3H11AO75152 810 aaKnown RBP eCLIP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 BANF1O75531 89 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NPM3O75607 178 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 IL18RAPO95256 599 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TIGD7Q6NT04 549 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DUS1LQ6P1R4 473 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 HAGHLQ6PII5 290 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ARMC8Q8IUR7 673 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 IQCF2Q8IXL9 164 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GPATCH2LQ9NWQ4 482 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 FAM160B2Q86V87 743 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 COMMD2Q86X83 199 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 IQCKQ8N0W5 287 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 UBA3Q8TBC4 463 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 HELQQ8TDG4 1101 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 SH2D3AQ9BRG2 576 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NMRAL1Q9HBL8 299 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 UBP1Q9NZI7 540 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TRPM5Q9NZQ8 1165 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 DNPEPQ9ULA0 475 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ABHD2P08910 425 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PTPN5P54829 565 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 RBP5P82980 135 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 INO80DQ53TQ3 878 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 C18orf25Q96B23 403 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 SPAG4Q9NPE6 437 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PTGFRNQ9P2B2 879 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MAU2Q9Y6X3 613 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 JCHAINP01591 159 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 MYL9P24844 172 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CEBPAP49715 358 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 AP3M2P53677 418 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 POU6F1Q14863 301 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 NAPEPLDQ6IQ20 393 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms