RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CCDC187A0A096LP49 1063 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 PLA2G6O60733 806 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 PGK2P07205 417 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 ALADP13716 330 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 HOXD9P28356 352 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-207ENST00000536634 ACLYP53396 1101 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 GSTO1P78417 241 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 SEMA3BQ13214 749 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 RAB30Q15771 203 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 CCDC144NLQ6NUI1 221 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 TATDN1Q6P1N9 297 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 XRRA1Q6P2D8 792 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 TLDC1Q6P9B6 456 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 PSRC1Q6PGN9 363 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-207ENST00000536634 TFAP2DQ7Z6R9 452 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 FOXP4Q8IVH2 680 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-207ENST00000536634 WDR63Q8IWG1 891 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 SPATA5Q8NB90 893 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 IPO4Q8TEX9 1081 aaKnown RBP6.03□□□□□ -1.44
CLIP1-207ENST00000536634 HERVK_113Q902F9 699 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 TNIP3Q96KP6 325 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 MLXIPLQ9NP71 852 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 DTNAQ9Y4J8 743 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 MTCH2Q9Y6C9 303 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 MCM3APO60318 1980 aa6.03□□□□□ -1.44
CLIP1-207ENST00000536634 COL4A4P53420 1690 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-207ENST00000536634 UMODL1Q5DID0 1318 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 A0A1W2PRG0 241 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 PI4K2BG5E9Z4 385 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 J3KTA2 159 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 PCDH17O14917 1159 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 STRNO43815 780 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 LDHCP07864 332 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 THBS4P35443 961 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 CDK7P50613 346 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 DYNLL1P63167 89 aaKnown RBP6.02□□□□□ -1.45
CLIP1-207ENST00000536634 CFHR1Q03591 330 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 TFCP2Q12800 502 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 PFKFB3Q16875 520 aaPredicted RBP6.02□□□□□ -1.45
CLIP1-207ENST00000536634 AAK1Q2M2I8 961 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 P3H1Q32P28 736 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 PAPD7Q5XG87 772 aaKnown RBP6.02□□□□□ -1.45
CLIP1-207ENST00000536634 FAM186BQ8IYM0 893 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 KLHDC9Q8NEP7 349 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 GJA10Q969M2 543 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 NUDT22Q9BRQ3 303 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 TM2D2Q9BX73 214 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 STK33Q9BYT3 514 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 NUAK2Q9H093 628 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 SLC28A3Q9HAS3 691 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 AGO4Q9HCK5 861 aaKnown RBP6.02□□□□□ -1.45
CLIP1-207ENST00000536634 NECTIN3Q9NQS3 549 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 RXFP3Q9NSD7 469 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 IGSF9Q9P2J2 1179 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 SLC39A10Q9ULF5 831 aa6.02□□□□□ -1.45
CLIP1-207ENST00000536634 RIF1Q5UIP0 2472 aaKnown RBP6.02□□□□□ -1.45
CLIP1-207ENST00000536634 PTPRCP08575 1304 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 ZNF521Q96K83 1311 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 CFAP47Q6ZTR5 3102 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 SCN5AQ14524 2016 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 PRYO14603 147 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 CTIFO43310 598 aaKnown RBP6.01□□□□□ -1.45
CLIP1-207ENST00000536634 AKR1A1P14550 325 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 SERPINB3P29508 390 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 SHMT1P34896 483 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 GSTM5P46439 218 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 GHRHRQ02643 423 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 MVPQ14764 893 aaKnown RBP6.01□□□□□ -1.45
CLIP1-207ENST00000536634 ELF2Q15723 593 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 CNGA3Q16281 694 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 SYCP2LQ5T4T6 812 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 NAA16Q6N069 864 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-207ENST00000536634 MSANTD2Q6P1R3 559 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 SKAP1Q86WV1 359 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 RASGRP3Q8IV61 690 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 TMEM199Q8N511 208 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 DENND1AQ8TEH3 1009 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 SCARB1Q8WTV0 552 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 NEUROD6Q96NK8 337 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 ELAC2Q9BQ52 826 aaKnown RBP6.01□□□□□ -1.45
CLIP1-207ENST00000536634 VPS16Q9H269 839 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 EPS8L2Q9H6S3 715 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 TM7SF3Q9NS93 570 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 NRBP1Q9UHY1 535 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 CDC23Q9UJX2 597 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 MAFFQ9ULX9 164 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 EPG5Q9HCE0 2579 aa6.01□□□□□ -1.45
CLIP1-207ENST00000536634 PTPRZ1P23471 2315 aaPredicted RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 NAV1Q8NEY1 1877 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 PTPRSQ13332 1948 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 HNRNPDLO14979 420 aaKnown RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 CTAGE5O15320 804 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 BAG3O95817 575 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 CD4P01730 458 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 ASGR1P07306 291 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 CA3P07451 260 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 UBTFL1P0CB47 393 aaPredicted RBP6□□□□□ -1.45
CLIP1-207ENST00000536634 DUSP1P28562 367 aa6□□□□□ -1.45
CLIP1-207ENST00000536634 TACR3P29371 465 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms