RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 GLMNQ92990 594 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 ALG9Q9H6U8 611 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 DKK3Q9UBP4 350 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 KANSL1LA0AUZ9 987 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 BIRC5O15392 142 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 MFN2O95140 757 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 HALP42357 657 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 DCTN2Q13561 401 aaKnown RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 IYDQ6PHW0 289 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 SLC24A5Q71RS6 500 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 APPL1Q9UKG1 709 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 CARNS1A5YM72 827 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 FASTKD3Q14CZ7 662 aaKnown RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 INTS6LQ5JSJ4 861 aaKnown RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 DRICH1Q6PGQ1 229 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 LPCAT2Q7L5N7 544 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 ZCCHC7Q8N3Z6 543 aaKnown RBP17.4■□□□□ 0.38
PHRF1-206ENST00000534320 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 ASZ1Q8WWH4 475 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 TMEM161AQ9NX61 479 aa17.4■□□□□ 0.38
PHRF1-206ENST00000534320 MSI1O43347 362 aaKnown RBP17.39■□□□□ 0.38
PHRF1-206ENST00000534320 KATNA1O75449 491 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 MLNP12872 115 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 PSMD5Q16401 504 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 TCHHL1Q5QJ38 904 aaPredicted RBP17.39■□□□□ 0.38
PHRF1-206ENST00000534320 TPGS1Q6ZTW0 290 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 CCDC185Q8N715 623 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 BRI3BPQ8WY22 251 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 MIEF2Q96C03 454 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 SNX15Q9NRS6 342 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.38
PHRF1-206ENST00000534320 A0A1W2PQH9 124 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 PRR23AA6NEV1 266 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 KRT6AP02538 564 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 KRT6BP04259 564 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 KRT6CP48668 564 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 CSTF3Q12996 717 aaKnown RBP17.39■□□□□ 0.37
PHRF1-206ENST00000534320 TEX44Q53QW1 395 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 IZUMO2Q6UXV1 221 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 STK40Q8N2I9 435 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
PHRF1-206ENST00000534320 SLC17A7Q9P2U7 560 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 KLHL20Q9Y2M5 609 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 NT5C1B-RDH14C9J2C7 533 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 MSH3P20585 1137 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 RAB10P61026 200 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 POTEHQ6S545 545 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 PACS2Q86VP3 889 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 RABGEF1Q9UJ41 708 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 CROTQ9UKG9 612 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 EDF1O60869 148 aaKnown RBP17.39■□□□□ 0.37
PHRF1-206ENST00000534320 OR4Q2P0C623 313 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 SLC2A4P14672 509 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 TCF3P15923 654 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 HDCP19113 662 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 LMO2P25791 158 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 GABRB2P47870 512 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 CHRNB3Q05901 458 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 SLC34A1Q06495 639 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 ANKRD22Q5VYY1 191 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 FAM45BPQ6NSW5 357 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 VSTM1Q6UX27 236 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 FAM45AQ8TCE6 357 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 IRGQQ8WZA9 623 aa17.39■□□□□ 0.37
PHRF1-206ENST00000534320 CLEC4MQ9H2X3 399 aaPredicted RBP17.39■□□□□ 0.37
PHRF1-206ENST00000534320 SCAMP3O14828 347 aaKnown RBP17.38■□□□□ 0.37
PHRF1-206ENST00000534320 BCL10O95999 233 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ATP5F1P24539 256 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-206ENST00000534320 SERPINA4P29622 427 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 IL2P60568 153 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 QPCTQ16769 361 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-206ENST00000534320 METTL6Q8TCB7 284 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 KCTD4Q8WVF5 259 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 OLFM1Q99784 485 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ACE2Q9BYF1 805 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-206ENST00000534320 SDCBP2Q9H190 292 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 MINDY3Q9H8M7 445 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 PRDM4Q9UKN5 801 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ARL5CA6NH57 179 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 PROCP04070 461 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 IMPDH2P12268 514 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 WARSP23381 471 aaKnown RBP17.38■□□□□ 0.37
PHRF1-206ENST00000534320 GPD2P43304 727 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 WNT3AP56704 352 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 C21orf59P57076 290 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ANGPT1Q15389 498 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 DCAF12L1Q5VU92 463 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ARHGAP17Q68EM7 881 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 SPPL2BQ8TCT7 592 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 PCED1BQ96HM7 432 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 GLOD4Q9HC38 313 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 ARHGEF4Q9NR80 690 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 FBXO5Q9UKT4 447 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 TAF4O00268 1085 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 AHCYL1O43865 530 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 RNASEH1O60930 286 aaKnown RBP17.38■□□□□ 0.37
PHRF1-206ENST00000534320 CTBP1Q13363 440 aa17.38■□□□□ 0.37
PHRF1-206ENST00000534320 IRGCQ6NXR0 463 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms