RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 C1orf61Q13536 156 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 FZD2Q14332 565 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 PTPRRQ15256 657 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SETMARQ53H47 684 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 PPP1R15BQ5SWA1 713 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 FBXL19Q6PCT2 694 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 ARHGAP36Q6ZRI8 547 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 Q6ZSR6 202 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 PTAR1Q7Z6K3 402 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 DSG4Q86SJ6 1040 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 ZSWIM9Q86XI8 627 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 ZNF354CQ86Y25 554 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 CPNE8Q86YQ8 564 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SFTPA2Q8IWL1 248 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 TMIEQ8NEW7 156 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 NEK11Q8NG66 645 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 CENPIQ92674 756 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 KLHL32Q96NJ5 620 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 KLF6Q99612 283 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 AGPAT1Q99943 283 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 HEPHQ9BQS7 1158 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 WRAP53Q9BUR4 548 aaKnown RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SELENOOQ9BVL4 669 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 PREBQ9HCU5 417 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 MBNL1Q9NR56 388 aaKnown RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 DNAJC28Q9NX36 388 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 RRN3Q9NYV6 651 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 RAI2Q9Y5P3 530 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SHROOM3Q8TF72 1996 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 A0A1W2PNU3 283 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 C16orf96A6NNT2 1141 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 BUB1O43683 1085 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 MMP20O60882 483 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PIAS2O75928 621 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 TMCC1O94876 653 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PRNPP04156 253 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PRB1P04280 392 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 SKILP12757 684 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 JUPP14923 745 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 RHOQP17081 205 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 HNRNPA2B1P22626 353 aaKnown RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 L1CAMP32004 1257 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 IGFALSP35858 605 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 ETFBP38117 255 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 EIF2S3P41091 472 aaKnown RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PTPN9P43378 593 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 NSFP46459 744 aaKnown RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 RXRGP48443 463 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 NEK3P51956 506 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 OXCT1P55809 520 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 MYL5Q02045 173 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 TYRO3Q06418 890 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 CYTH1Q15438 398 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 DEFB133Q30KQ1 61 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 ANO6Q4KMQ2 910 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 FKBP15Q5T1M5 1219 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 SASS6Q6UVJ0 657 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 IRF2BP2Q7Z5L9 587 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PDZD3Q86UT5 571 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PHF13Q86YI8 300 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 NAF1Q96HR8 494 aaKnown RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 NAP1L5Q96NT1 182 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 SYT11Q9BT88 431 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 SLC17A9Q9BYT1 436 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 DYRK4Q9NR20 520 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 TMEM248Q9NWD8 314 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PPARGC1AQ9UBK2 798 aaKnown RBP9.05□□□□□ -0.96
HDAC3-211ENST00000491581 LHX3Q9UBR4 397 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 PCSK1NQ9UHG2 260 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 FZD10Q9ULW2 581 aa9.05□□□□□ -0.96
HDAC3-211ENST00000491581 BPTFQ12830 3046 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 A0A0U1RQS6 177 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 LRRC53A6NM62 1247 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 A8MX80 341 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 RAMP2O60895 175 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 GCATO75600 419 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 KRT10P13645 584 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 CKMT2P17540 419 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 CDK11BP21127 795 aaKnown RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 ITGB7P26010 798 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 EPHB2P29323 1055 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 RECQLP46063 649 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 ARRB1P49407 418 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 SNX16P57768 344 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 EIF2B5Q13144 721 aaKnown RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 PDE1CQ14123 709 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 POLD3Q15054 466 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 STX1AQ16623 288 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 CDKN3Q16667 212 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 SOWAHCQ53LP3 525 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 SLC45A4Q5BKX6 768 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 TXNRD3NBQ6F5E7 133 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 RETSATQ6NUM9 610 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 DNAJC24Q6P3W2 148 aa9.04□□□□□ -0.96
HDAC3-211ENST00000491581 CYP4V2Q6ZWL3 525 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-211ENST00000491581 STRADAQ7RTN6 431 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms