RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TATDN2Q93075 761 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 C1QTNF2Q9BXJ5 285 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 ASPSCR1Q9BZE9 553 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 LRIT1Q9P2V4 623 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 FADS3Q9Y5Q0 445 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 MRPS18BQ9Y676 258 aaKnown RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.04
UFD1-209ENST00000489406 EXOC3O60645 756 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 CPNE6O95741 557 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 PRNPP04156 253 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 PNLIPP16233 465 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 HOXB4P17483 251 aaPredicted RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 EIF4A3P38919 411 aaKnown RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 LEPRP48357 1165 aaKnown RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 SLC8A3P57103 927 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 NUCB2P80303 420 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 CRTC2Q53ET0 693 aaPredicted RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 CEP135Q66GS9 1140 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 RAP1GAP2Q684P5 730 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 RD3Q7Z3Z2 195 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 KDELC2Q7Z4H8 507 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 CIR1Q86X95 450 aaPredicted RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 CCDC65Q8IXS2 484 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 NRSN1Q8IZ57 195 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 ANKRD52Q8NB46 1076 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 OR2A12Q8NGT7 310 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 TSACCQ96A04 125 aaPredicted RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 FCRL2Q96LA5 508 aaPredicted RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 CCDC74BQ96LY2 380 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 DNAI2Q9GZS0 605 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 CYP3A43Q9HB55 503 aa15.33■□□□□ 0.04
UFD1-209ENST00000489406 XPO7Q9UIA9 1087 aaKnown RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 TNRC6AQ8NDV7 1962 aaKnown RBP15.33■□□□□ 0.04
UFD1-209ENST00000489406 IGHV5-10-1A0A0J9YXX1 117 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 B4GAT1O43505 415 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 BLKP51451 505 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 NEK3P51956 506 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 HK3P52790 923 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 DLG4P78352 724 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 CLDN10P78369 228 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 B4GALNT1Q00973 533 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 ZACNQ401N2 412 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 DCAF12Q5T6F0 453 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 ANKS6Q68DC2 871 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 MACC1Q6ZN28 852 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 CHSY1Q86X52 802 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 SIX6OS1Q8N1H7 587 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 NANOS1Q8WY41 292 aaKnown RBP15.32■□□□□ 0.04
UFD1-209ENST00000489406 ALG14Q96F25 216 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 LURAP1Q96LR2 239 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 NUDT22Q9BRQ3 303 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
UFD1-209ENST00000489406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.04
UFD1-209ENST00000489406 LUZP4Q9P127 313 aa15.32■□□□□ 0.04
UFD1-209ENST00000489406 OAS3Q9Y6K5 1087 aaKnown RBP15.32■□□□□ 0.04
UFD1-209ENST00000489406 HLA-DRAP01903 254 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 SRCP12931 536 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 ADRB3P13945 408 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 PDCP20941 246 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 TACR2P21452 398 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 IGFALSP35858 605 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 PIK3CAP42336 1068 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 YPEL5P62699 121 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
UFD1-209ENST00000489406 DENND6BQ8NEG7 585 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 PPP1R16AQ96I34 528 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 CCDC114Q96M63 670 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 OCIAD1Q9NX40 245 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 RRN3Q9NYV6 651 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 LIMCH1Q9UPQ0 1083 aa15.31■□□□□ 0.04
UFD1-209ENST00000489406 XPO1O14980 1071 aaKnown RBP15.3■□□□□ 0.04
UFD1-209ENST00000489406 DNAJB5O75953 348 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 TACC2O95359 2948 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 MT-CO1P00395 513 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 FURINP09958 794 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 LCP1P13796 627 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 CSTF2P33240 577 aaKnown RBP eCLIP15.3■□□□□ 0.04
UFD1-209ENST00000489406 OR1D5P58170 312 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 DAOAP59103 153 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 ABHD18Q0P651 414 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 ERV3-1Q14264 604 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 NR6A1Q15406 480 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 ALG11Q2TAA5 492 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 CROCCQ5TZA2 2017 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 NYAP1Q6ZVC0 841 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 CENPQQ7L2Z9 268 aaPredicted RBP15.3■□□□□ 0.04
UFD1-209ENST00000489406 EPM2AIP1Q7L775 607 aaPredicted RBP15.3■□□□□ 0.04
UFD1-209ENST00000489406 VPS36Q86VN1 386 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 FAM129CQ86XR2 697 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 XYLT1Q86Y38 959 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 ATP11CQ8NB49 1132 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 AGBL5Q8NDL9 886 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 OR52K2Q8NGK3 314 aa15.3■□□□□ 0.04
UFD1-209ENST00000489406 KCTD13Q8WZ19 329 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms