RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 HDAC8Q9BY41 377 aa11.41□□□□□ -0.58
SORT1-204ENST00000482236 NDFIP2Q9NV92 336 aa11.41□□□□□ -0.58
SORT1-204ENST00000482236 AIPL1Q9NZN9 384 aa11.41□□□□□ -0.58
SORT1-204ENST00000482236 CA5BQ9Y2D0 317 aa11.41□□□□□ -0.58
SORT1-204ENST00000482236 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
SORT1-204ENST00000482236 PCDH15Q96QU1 1955 aa11.41□□□□□ -0.58
SORT1-204ENST00000482236 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 A0A1B0GTQ1 180 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 A0A1W2PQJ5 194 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 H3BM21 787 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 DDX3XO00571 662 aaKnown RBP eCLIP11.4□□□□□ -0.58
SORT1-204ENST00000482236 FPGTO14772 594 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 TNFSF14O43557 240 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 LATO43561 262 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 SDC3O75056 442 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 GJB3O75712 270 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 PALMO75781 387 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ZMPSTE24O75844 475 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 LDOC1O95751 146 aaPredicted RBP11.4□□□□□ -0.58
SORT1-204ENST00000482236 TOP3BO95985 862 aaKnown RBP11.4□□□□□ -0.58
SORT1-204ENST00000482236 ALPPL2P10696 532 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 GKP32189 559 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 PRKCIP41743 596 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 PI4KAP42356 2102 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 DAB2P98082 770 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 TRIM14Q14142 442 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ZNF235Q14590 738 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 NR1I3Q14994 352 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 SMTNL2Q2TAL5 461 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 MYLK3Q32MK0 819 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ODF2Q5BJF6 829 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ZNF805Q5CZA5 627 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 FIGNQ5HY92 759 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 LRRC73Q5JTD7 316 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 CCDC122Q5T0U0 273 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 SEL1L3Q68CR1 1132 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 PLEKHA7Q6IQ23 1121 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ERAP2Q6P179 960 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 GDPD4Q6W3E5 623 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 RFX8Q6ZV50 586 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 TTC7BQ86TV6 843 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 BBS5Q8N3I7 341 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 EID2Q8N6I1 236 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ZCCHC14Q8WYQ9 949 aaKnown RBP11.4□□□□□ -0.58
SORT1-204ENST00000482236 RAB7BQ96AH8 199 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ISG20Q96AZ6 181 aaKnown RBP11.4□□□□□ -0.58
SORT1-204ENST00000482236 LRIG1Q96JA1 1093 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 CNDP2Q96KP4 475 aaKnown RBP11.4□□□□□ -0.58
SORT1-204ENST00000482236 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 NUP85Q9BW27 656 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 MAGEB5Q9BZ81 275 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.4□□□□□ -0.58
SORT1-204ENST00000482236 EVA1BQ9NVM1 165 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 ANAPC7Q9UJX3 599 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 KLK13Q9UKR3 277 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 NEUROG3Q9Y4Z2 214 aa11.4□□□□□ -0.58
SORT1-204ENST00000482236 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.59
SORT1-204ENST00000482236 NUMA1Q14980 2115 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 C16orf96A6NNT2 1141 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 FFAR2O15552 330 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 TSPAN6O43657 245 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 PCDHGA12O60330 932 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 WNT1P04628 370 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 C1QTNF9P0C862 333 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 EPHA8P29322 1005 aaPredicted RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 MIPP30301 263 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 HNF1BP35680 557 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 ZNF135P52742 658 aaPredicted RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 NDST2P52849 883 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 THOP1P52888 689 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 CLDN2P57739 230 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 OGDHQ02218 1023 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 SERINC3Q13530 473 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 PIGHQ14442 188 aaPredicted RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 KCNT1Q5JUK3 1230 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 E4F1Q66K89 784 aaPredicted RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 TMCO3Q6UWJ1 677 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 IQCHQ86VS3 1027 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 ZSCAN30Q86W11 494 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 NETO2Q8NC67 525 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 RNF214Q8ND24 703 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
SORT1-204ENST00000482236 TTYH3Q9C0H2 523 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 EBF2Q9HAK2 575 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 DNAJC28Q9NX36 388 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 IP6K2Q9UHH9 426 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 ITM2BQ9Y287 266 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 BTBD3Q9Y2F9 522 aa11.39□□□□□ -0.59
SORT1-204ENST00000482236 A0A1W2PR77 199 aa11.38□□□□□ -0.59
SORT1-204ENST00000482236 TCRBV5S1A1TA0A578 114 aa11.38□□□□□ -0.59
SORT1-204ENST00000482236 TMEM8BA6NDV4 472 aa11.38□□□□□ -0.59
SORT1-204ENST00000482236 TMEM191CA6NGB0 347 aa11.38□□□□□ -0.59
SORT1-204ENST00000482236 TMEM110-MUSTN1A8MSY1 372 aa11.38□□□□□ -0.59
SORT1-204ENST00000482236 MYO1FO00160 1098 aa11.38□□□□□ -0.59
SORT1-204ENST00000482236 ENC1O14682 589 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms