RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 LGR6Q9HBX8 967 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 MRPL40Q9NQ50 206 aaKnown RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ABCB10Q9NRK6 738 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 GRIP1Q9Y3R0 1128 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 AUP1Q9Y679 476 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 KIF1AQ12756 1690 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 TRPM3Q9HCF6 1732 aaPredicted RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ATRNL1Q5VV63 1379 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PDHXO00330 501 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 TRDMT1O14717 391 aaKnown RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ARHGEF9O43307 516 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ECDO95905 644 aaPredicted RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 STMN1P16949 149 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 GLRA2P23416 452 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 NR2F2P24468 414 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 AXLP30530 894 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 CYP2C18P33260 490 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 RFC4P35249 363 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 MAPK12P53778 367 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PLA2G16P53816 162 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 AP1S2P56377 157 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ACTR2P61160 394 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 KLF1Q13351 362 aaPredicted RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PEX6Q13608 980 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 RFTN1Q14699 578 aaPredicted RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PPP1R3AQ16821 1122 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 Q3ZCU0 254 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 LRRC24Q50LG9 513 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 WDR44Q5JSH3 913 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 XAF1Q6GPH4 301 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 LIX1LQ8IVB5 337 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF564Q8TBZ8 553 aaPredicted RBP10.87□□□□□ -0.67
LINC00342-202ENST00000448494 VCPIP1Q96JH7 1222 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 PPA2Q9H2U2 334 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 LRRC40Q9H9A6 602 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 SP110Q9HB58 689 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 GTF2IRD1Q9UHL9 959 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 RAD54BQ9Y620 910 aa10.87□□□□□ -0.67
LINC00342-202ENST00000448494 UBE4BO95155 1302 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 TCRBV5S4A2TA0A5A2 114 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 LINC00862A6NCI5 91 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 OR6C65A6NJZ3 312 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 DLGAP1O14490 977 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 TECPR2O15040 1411 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 ZMPSTE24O75844 475 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 GZMAP12544 262 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 IL7P13232 177 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 NPR3P17342 541 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 TCN1P20061 433 aaPredicted RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 ADORA1P30542 326 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 POLR2IP36954 125 aaKnown RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 GNPDA1P46926 289 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 MGAT3Q09327 533 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 HIF1AQ16665 826 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 STEAP3Q658P3 488 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 TMEM65Q6PI78 240 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 PLCZ1Q86YW0 608 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 MICU2Q8IYU8 434 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 PHTF2Q8N3S3 785 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 KCT2Q8NC54 265 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 ST13P5Q8NFI4 369 aaPredicted RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 ZFAND1Q8TCF1 268 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 ASB9Q96DX5 294 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF512BQ96KM6 892 aaPredicted RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 FUNDC2Q9BWH2 189 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 BRIP1Q9BX63 1249 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 IL37Q9NZH6 218 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 IFT80Q9P2H3 777 aaPredicted RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 MBD2Q9UBB5 411 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 SLCO3A1Q9UIG8 710 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 TRMT6Q9UJA5 497 aaKnown RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 FBXO5Q9UKT4 447 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 MAN2B2Q9Y2E5 1009 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 MARF1Q9Y4F3 1742 aaKnown RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 PCDHA8Q9Y5H6 950 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 SNX13Q9Y5W8 968 aa10.86□□□□□ -0.67
LINC00342-202ENST00000448494 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
LINC00342-202ENST00000448494 CCDC195A0A1B0GUA6 201 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 RGSL1A5PLK6 1076 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 LINC01387J3KSC0 135 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 SOCS2O14508 198 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 APOL1O14791 398 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 SLC16A3O15427 465 aaKnown RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 APOA1P02647 267 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 TMEM191BP0C7N4 346 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 NCF2P19878 526 aaPredicted RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 FGFR3P22607 806 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 CD83Q01151 205 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
LINC00342-202ENST00000448494 NFIAQ12857 509 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 RIN1Q13671 783 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 GALEQ14376 348 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 CTF1Q16619 201 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 PLEKHG6Q3KR16 790 aa10.85□□□□□ -0.67
LINC00342-202ENST00000448494 ADCK1Q86TW2 530 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms