RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PRDM5Q9NQX1 630 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 MAPRE3Q9UPY8 281 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 LTA4HP09960 611 aaKnown RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 MARCKSL1P49006 195 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 IL27RAQ6UWB1 636 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 SCUBE2Q9NQ36 999 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 A0A1W2PRG6 482 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 SLITRK3O94933 977 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 TGDSO95455 350 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 HMGCRP04035 888 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 EPHA3P29320 983 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 GRK3P35626 688 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 SLC11A2P49281 568 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 KHDC1Q4VXA5 237 aaKnown RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 AKIRIN2Q53H80 203 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 RASGEF1CQ8N431 466 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 TMEM109Q9BVC6 243 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 ADGRE3Q9BY15 652 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 CDH19Q9H159 772 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 PRDM16Q9HAZ2 1276 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 CDH22Q9UJ99 828 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 CLDN25C9JDP6 229 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 H3BMM5 538 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 H7C4K7 107 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ZBTB11O95625 1053 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 LHX1P48742 406 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 GSCP56915 257 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 PTSQ03393 145 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 PPIL2Q13356 520 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ZPBP2Q6X784 338 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 CERS2Q96G23 380 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 SLC17A7Q9P2U7 560 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 KPNA6O60684 536 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 STARP49675 285 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ITGA7Q13683 1181 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 MARC1Q5VT66 337 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ZCCHC8Q6NZY4 707 aaKnown RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 SATL1Q86VE3 508 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 HPS6Q86YV9 775 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ADGRF2Q8IZF7 708 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 TBL1YQ9BQ87 522 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ACE2Q9BYF1 805 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 SPATC1LQ9H0A9 340 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 NOL11Q9H8H0 719 aaKnown RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 PCDHB7Q9Y5E2 793 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 CLUHO75153 1309 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 F5H5T6 163 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 RCVRNP35243 200 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 MAPKAPK2P49137 400 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 OLR1P78380 273 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 CCNIQ14094 377 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 C6orf52Q5T4I8 152 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 REXO5Q96IC2 774 aaKnown RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 PWWP2AQ96N64 755 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 RPS6KB2Q9UBS0 482 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 KCNK1O00180 336 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 TRAFD1O14545 582 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 ITGA2BP08514 1039 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 NOS3P29474 1203 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 OXCT1P55809 520 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 LAMTOR4Q0VGL1 99 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 FNBP1LQ5T0N5 605 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 LIN54Q6MZP7 749 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 FBXO16Q8IX29 292 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 TUBGCP5Q96RT8 1024 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 MRIQ9BWK5 157 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 IL22Q9GZX6 179 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 PNPLA8Q9NP80 782 aa18.8■□□□□ 0.6
SHANK3-203ENST00000445220 NFKBIL1Q9UBC1 381 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-203ENST00000445220 CYB561D2O14569 222 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 CXCL11O14625 94 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 HOXA2O43364 376 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 PLOD3O60568 738 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 B3GAT3O94766 335 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 SLC7A2P52569 658 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 IL18R1Q13478 541 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 CXorf21Q9HAI6 301 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 KLK14Q9P0G3 267 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 CCNE2O96020 404 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 S100A6P06703 90 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 BPGMP07738 259 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 IRF1P10914 325 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 PIK3CGP48736 1102 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 PRKCQQ04759 706 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 INTS11Q5TA45 600 aaKnown RBP18.79■□□□□ 0.6
SHANK3-203ENST00000445220 NBPF12Q5TAG4 269 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-203ENST00000445220 LEMD2Q8NC56 503 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 SSR3Q9UNL2 185 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 FAM86B1E9PN63 330 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 BTN3A1O00481 513 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 KLF10Q13118 480 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 LIPMQ5VYY2 423 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 PROSER1Q86XN7 944 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 PIK3C3Q8NEB9 887 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 CLPTM1LQ96KA5 538 aa18.79■□□□□ 0.6
SHANK3-203ENST00000445220 GPATCH1Q9BRR8 931 aaKnown RBP18.79■□□□□ 0.6
SHANK3-203ENST00000445220 DNAAF2Q9NVR5 837 aaKnown RBP18.79■□□□□ 0.6
SHANK3-203ENST00000445220 ABI2Q9NYB9 513 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms