RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 PTP4A2Q12974 167 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 AUHQ13825 339 aaKnown RBP11.91□□□□□ -0.5
MRPL55-213ENST00000366740 LY6DQ14210 128 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 ZCCHC8Q6NZY4 707 aaKnown RBP11.91□□□□□ -0.5
MRPL55-213ENST00000366740 IRF2BP2Q7Z5L9 587 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 PHLDB2Q86SQ0 1253 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 ZDHHC17Q8IUH5 632 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 SLC30A5Q8TAD4 765 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 IFI44Q8TCB0 444 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 NT5C3BQ969T7 300 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 GRAMD1AQ96CP6 724 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 PRR11Q96HE9 360 aaPredicted RBP11.91□□□□□ -0.5
MRPL55-213ENST00000366740 HDAC8Q9BY41 377 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 FAM204AQ9H8W3 233 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 EVA1BQ9NVM1 165 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 DDIT4Q9NX09 232 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 COX16Q9P0S2 106 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 TMEM59LQ9UK28 342 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 VANGL2Q9ULK5 521 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 SATB2Q9UPW6 733 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 HS3ST4Q9Y661 456 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 HS3ST3A1Q9Y663 406 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 PTPN13Q12923 2485 aa11.91□□□□□ -0.5
MRPL55-213ENST00000366740 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 K7ENP7 123 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 M0QYT0 321 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 KPNA3O00505 521 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 BNIP3LO60238 219 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 MT-CO1P00395 513 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 CSF2P04141 144 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 PRNPP04156 253 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 NME1P15531 152 aaKnown RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 MMP8P22894 467 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 FLT3P36888 993 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 CDH4P55283 916 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 CLDN2P57739 230 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 SNX16P57768 344 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 NME3Q13232 169 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 ZNF177Q13360 481 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 FZD2Q14332 565 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 RAB6CQ53S08 254 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 C3orf38Q5JPI3 329 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 INO80CQ6PI98 192 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 KYAT3Q6YP21 454 aaKnown RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 Q6ZSR6 202 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 ZNF548Q8NEK5 533 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 MAPK15Q8TD08 544 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 RNF34Q969K3 372 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 MED8Q96G25 268 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 BMFQ96LC9 184 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 SLC46A1Q96NT5 459 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 TBCBQ99426 244 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 AGPAT1Q99943 283 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 RAB6CQ9H0N0 254 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 PIGVQ9NUD9 493 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 DNAJC28Q9NX36 388 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 VPS51Q9UID3 782 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-213ENST00000366740 PCDHGA8Q9Y5G5 932 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 ENTPD2Q9Y5L3 495 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 CSNK1G3Q9Y6M4 447 aa11.9□□□□□ -0.5
MRPL55-213ENST00000366740 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.51
MRPL55-213ENST00000366740 UBR5O95071 2799 aaPredicted RBP11.9□□□□□ -0.51
MRPL55-213ENST00000366740 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 A0A1W2PQC6 194 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 EME2A4GXA9 379 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-213ENST00000366740 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 SNAP91O60641 907 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 PAGE1O75459 146 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 NEBLO76041 1014 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 GJB6O95452 261 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 ADCY5O95622 1261 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 PTMSP20962 102 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 SCNN1AP37088 669 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 GGCXP38435 758 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-213ENST00000366740 CLCN6P51797 869 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 KRT83P78385 493 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 FANCCQ00597 558 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 FGL2Q14314 439 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 SKOR2Q2VWA4 1001 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-213ENST00000366740 ARTNQ5T4W7 220 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 FAM102AQ5T9C2 384 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-213ENST00000366740 E4F1Q66K89 784 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-213ENST00000366740 SEL1L3Q68CR1 1132 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 KIAA1161Q6NSJ0 714 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 C22orf39Q6P5X5 142 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 BNIPLQ7Z465 357 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 PTAR1Q7Z6K3 402 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-213ENST00000366740 C14orf80Q86SX3 495 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 CLEC14AQ86T13 490 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 PARGQ86W56 976 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 ZNF683Q8IZ20 524 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 EMC1Q8N766 993 aa11.89□□□□□ -0.51
MRPL55-213ENST00000366740 ATP11CQ8NB49 1132 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms