RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 RPL4P36578 427 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 RANBP1P43487 201 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PACS1Q6VY07 963 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 DDX20Q9UHI6 824 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 SNX10Q9Y5X0 201 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 EPN2O95208 641 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 PAICSP22234 425 aaKnown RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 PSMB9P28065 219 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 CLK3P49761 638 aaKnown RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 MTAPQ13126 283 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 TRIM71Q2Q1W2 868 aaKnown RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 RHOBTB2Q9BYZ6 727 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 CCDC189A1A4V9 331 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 PEX11AO75192 247 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 GLI1P08151 1106 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 MC4RP32245 332 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 GP5P40197 560 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 NEK10Q6ZWH5 1172 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 RAVER1Q8IY67 606 aaKnown RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 OR52K2Q8NGK3 314 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 DNAJC9Q8WXX5 260 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 SOX6P35712 828 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 C11orf88Q6PI97 169 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 MTMR8Q96EF0 704 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 GIT1Q9Y2X7 761 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 ENPP3O14638 875 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 AKT2P31751 481 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 DSG1Q02413 1049 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 HEATR4Q86WZ0 1026 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 TCF7L2Q9NQB0 619 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 EVLQ9UI08 416 aaPredicted RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 ZNF862O60290 1169 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 CNTFP26441 200 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 PRKG2Q13237 762 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 PPIGQ13427 754 aaKnown RBP eCLIP20.48■□□□□ 0.872e-7■□□□□ 10.5
CDC42BPB-201ENST00000361246 STXBP5Q5T5C0 1151 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 C3orf20Q8ND61 904 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 SLAIN1Q8ND83 568 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 RNFT2Q96EX2 444 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 ERN1O75460 977 aaKnown RBP20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 PDE5AO76074 875 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 CTBP1Q13363 440 aa20.48■□□□□ 0.87
CDC42BPB-201ENST00000361246 IQGAP1P46940 1657 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 PAGE1O75459 146 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 CATP04040 527 aaKnown RBP20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 CYP2C18P33260 490 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 COX10Q12887 443 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 ADGRG2Q8IZP9 1017 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 GALNT8Q9NY28 637 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 KLC1Q07866 573 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 CBX2Q14781 532 aaPredicted RBP20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 SPRTNQ9H040 489 aaPredicted RBP20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 GDF6Q6KF10 455 aaPredicted RBP20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 OLFM1Q99784 485 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 SH3GL1Q99961 368 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 BLOC1S4Q9NUP1 217 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 REREQ9P2R6 1566 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 FGF10O15520 208 aaPredicted RBP20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 GNRH1P01148 92 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 CDC25CP30307 473 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 TIE1P35590 1138 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 RNF31Q96EP0 1072 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 GMEB2Q9UKD1 530 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 ZNF232Q9UNY5 417 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 ABHD14A-ACY1A0A1B0GW23 586 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 PER2O15055 1255 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 MAMLD1Q13495 774 aa20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 RPL10LQ96L21 214 aaKnown RBP20.47■□□□□ 0.87
CDC42BPB-201ENST00000361246 UGT2B4P06133 528 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 MCL1Q07820 350 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 NAT9Q9BTE0 207 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 GANQ9H2C0 597 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 RPTORQ8N122 1335 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 A0A087X1B8 175 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 SEMA5AQ13591 1074 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 MRPL39Q9NYK5 338 aaKnown RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 ADAM28Q9UKQ2 775 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 TMEM237Q96Q45 408 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 TOR4AQ9NXH8 423 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 KIAA1522Q9P206 1035 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 ANAPC2Q9UJX6 822 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 PTGES3LE9PB15 166 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 ZMPSTE24O75844 475 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 TFPIP10646 304 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 LAG3P18627 525 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 CASP7P55210 303 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 MAD2L1Q13257 205 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 CRHR2Q13324 411 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 CCDC153Q494R4 210 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 PHYKPLQ8IUZ5 450 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 MRPL48Q96GC5 212 aaKnown RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 SLC27A6Q9Y2P4 619 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 DNALI1O14645 258 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 RIPK2O43353 540 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 PSMC3P17980 439 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 ITPKAP23677 461 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 PKNOX1P55347 436 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 PTPRNQ16849 979 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms