RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 ENC1O14682 589 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 GIPC1O14908 333 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 MATN3O15232 486 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 ALOX15BO15296 676 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 MAFKO60675 156 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 CHRM1P11229 460 aaPredicted RBP19.03■□□□□ 0.64
CDHR4-201ENST00000343366 SRCP12931 536 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 HOXB2P14652 356 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 IL12RB1P42701 662 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 RECQLP46063 649 aaPredicted RBP19.03■□□□□ 0.64
CDHR4-201ENST00000343366 GBE1Q04446 702 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 PPIDQ08752 370 aaKnown RBP19.03■□□□□ 0.64
CDHR4-201ENST00000343366 ZNF211Q13398 564 aaPredicted RBP19.03■□□□□ 0.64
CDHR4-201ENST00000343366 CRY1Q16526 586 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 ACCSLQ4AC99 568 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 DSG4Q86SJ6 1040 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 SFTPA1Q8IWL2 248 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 CCNYQ8ND76 341 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 TFB1MQ8WVM0 346 aaKnown RBP19.03■□□□□ 0.64
CDHR4-201ENST00000343366 SORCS1Q8WY21 1168 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 GATA6Q92908 595 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 MYO19Q96H55 970 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 OLFM3Q96PB7 478 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 DUSP15Q9H1R2 295 aaPredicted RBP19.03■□□□□ 0.64
CDHR4-201ENST00000343366 PDFQ9HBH1 243 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 SNX12Q9UMY4 172 aa19.03■□□□□ 0.64
CDHR4-201ENST00000343366 SMG1Q96Q15 3661 aaKnown RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 RNASEH1O60930 286 aaKnown RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 ATP1A1P05023 1023 aaKnown RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 EPHX1P07099 455 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 CES1P23141 567 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 CTSOP43234 321 aaPredicted RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 SNRPD1P62314 119 aaKnown RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 RAD51Q06609 339 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 NSUN2Q08J23 767 aaKnown RBP eCLIP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 SFSWAPQ12872 951 aaKnown RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 SLC10A2Q12908 348 aaPredicted RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 KLF1Q13351 362 aaPredicted RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 CAMK2GQ13555 558 aaPredicted RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 GRM3Q14832 879 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 NOMO1Q15155 1222 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 DLG2Q15700 870 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 MARC1Q5VT66 337 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 PAPD7Q5XG87 772 aaKnown RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 ZSCAN30Q86W11 494 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 SLC13A5Q86YT5 568 aaPredicted RBP19.02■□□□□ 0.64
CDHR4-201ENST00000343366 CCDC13Q8IYE1 715 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 OSBPL9Q96SU4 736 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 CACNA2D2Q9NY47 1150 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 RNF14Q9UBS8 474 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 SEPT3Q9UH03 358 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 HCN2Q9UL51 889 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 MFHAS1Q9Y4C4 1052 aa19.02■□□□□ 0.64
CDHR4-201ENST00000343366 TNRC6BQ9UPQ9 1833 aaKnown RBP19.02■□□□□ 0.63
CDHR4-201ENST00000343366 CKAP5Q14008 2032 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 PCNX2A6NKB5 2137 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 MCF2LO15068 1137 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 CEP104O60308 925 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 NEBLO76041 1014 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 GSRP00390 522 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 GLDCP23378 1020 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 CASQ1P31415 396 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 MAPK8P45983 427 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 ELAVL3Q14576 367 aaKnown RBP19.01■□□□□ 0.63
CDHR4-201ENST00000343366 LBRQ14739 615 aaKnown RBP19.01■□□□□ 0.63
CDHR4-201ENST00000343366 RALGPS1Q5JS13 557 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 C22orf39Q6P5X5 142 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 RASGEF1CQ8N431 466 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 CCDC33Q8N5R6 958 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 FRS2Q8WU20 508 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 LRIG1Q96JA1 1093 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 VAT1Q99536 393 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 CINPQ9BW66 212 aaPredicted RBP19.01■□□□□ 0.63
CDHR4-201ENST00000343366 POLR3BQ9NW08 1133 aaPredicted RBP19.01■□□□□ 0.63
CDHR4-201ENST00000343366 SLCO3A1Q9UIG8 710 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 SAR1BQ9Y6B6 198 aa19.01■□□□□ 0.63
CDHR4-201ENST00000343366 J3KR12 359 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 SGK1O00141 431 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 ADAM23O75077 832 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 TMCC1O94876 653 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 MT-CO1P00395 513 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 C7P10643 843 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 CSNK1DP48730 415 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 STK19P49842 368 aaPredicted RBP19■□□□□ 0.63
CDHR4-201ENST00000343366 ZNF235Q14590 738 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 LINGO4Q6UY18 593 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 NYAP1Q6ZVC0 841 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 CDKL3Q8IVW4 592 aaPredicted RBP19■□□□□ 0.63
CDHR4-201ENST00000343366 TEX26Q8N6G2 289 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 ACTL9Q8TC94 416 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 ACTRT1Q8TDG2 376 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 MAML1Q92585 1016 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 PTPRN2Q92932 1015 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 PSKH2Q96QS6 385 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 WDR24Q96S15 920 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 ACOX2Q99424 681 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 EDEM2Q9BV94 578 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 EIF2AK3Q9NZJ5 1116 aaKnown RBP19■□□□□ 0.63
CDHR4-201ENST00000343366 SCML1Q9UN30 329 aa19■□□□□ 0.63
CDHR4-201ENST00000343366 THADAQ6YHU6 1953 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms