RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 FGF1P05230 155 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 CCDC142Q17RM4 750 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 TMEM26Q6ZUK4 368 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 SLC41A1Q8IVJ1 513 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 ACTRT2Q8TDY3 377 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 RSPH1Q8WYR4 309 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 CXorf40BQ96DE9 158 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 SYBUQ9NX95 663 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 FCHO1O14526 889 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 CYP7B1O75881 506 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 CLTBP09497 229 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 ETS1P14921 441 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 FASP25445 335 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 IRF8Q02556 426 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 FRG1Q14331 258 aaKnown RBP13.41□□□□□ -0.26
SMG9-201ENST00000270066 LCLAT1Q6UWP7 414 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 CCDC103Q8IW40 242 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 BSNDQ8WZ55 320 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 MCCC1Q96RQ3 725 aaPredicted RBP13.41□□□□□ -0.26
SMG9-201ENST00000270066 SH3GL2Q99962 352 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 ALG9Q9H6U8 611 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 TBC1D14Q9P2M4 693 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 SEPT4O43236 478 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 FGBP02675 491 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 LPOP22079 712 aaPredicted RBP13.41□□□□□ -0.26
SMG9-201ENST00000270066 TLX1P31314 330 aaPredicted RBP13.41□□□□□ -0.26
SMG9-201ENST00000270066 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 DHFR2Q86XF0 187 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 IRGQQ8WZA9 623 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 UGT2B28Q9BY64 529 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 PDZD7Q9H5P4 517 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 ATAD3AQ9NVI7 634 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 AP4S1Q9Y587 144 aa13.41□□□□□ -0.26
SMG9-201ENST00000270066 C1orf232A0A0U1RR37 186 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 GRM6O15303 877 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 TREHO43280 583 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 CLDN11O75508 207 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 SMNDC1O75940 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMG9-201ENST00000270066 IL1BP01584 269 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 AMD1P17707 334 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 HNRNPH3P31942 346 aaKnown RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 ATP1A4Q13733 1029 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 SPIDRQ14159 915 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 NCF4Q15080 339 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 SHROOM1Q2M3G4 852 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 CPA6Q8N4T0 437 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 SPPL2AQ8TCT8 520 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 BTN2A3PQ96KV6 586 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 ST6GALNAC4Q9H4F1 302 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 LRCH1Q9Y2L9 728 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 PRR23D1E9PI22 279 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 TSPAN1O60635 241 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 MLYCDO95822 493 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 PRR23D2P0DMB1 279 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 NEK3P51956 506 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 HSPA14Q0VDF9 509 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 RINLQ6ZS11 566 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 HEXDCQ8WVB3 486 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 FCRL2Q96LA5 508 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 TMPRSS4Q9NRS4 437 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 ZDHHC20Q5W0Z9 365 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 UNC5AQ6ZN44 842 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 ARHGAP28Q9P2N2 729 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 PSME2Q9UL46 239 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 GPSM3Q9Y4H4 160 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 EPHB6O15197 1021 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 PIGNO95427 931 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 CBX6O95503 412 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 COX7A2P14406 83 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 NUP107P57740 925 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 CDK18Q07002 472 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 MPPE1Q53F39 396 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 ZBTB49Q6ZSB9 765 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 MARK2Q7KZI7 788 aaKnown RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 EID3Q8N140 333 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 ACMSDQ8TDX5 336 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 BDH2Q9BUT1 245 aa13.4□□□□□ -0.26
SMG9-201ENST00000270066 SEMA4BQ9NPR2 832 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 RCOR3Q9P2K3 495 aaPredicted RBP13.4□□□□□ -0.26
SMG9-201ENST00000270066 A0A1W2PQH9 124 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 CILPO75339 1184 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 PAGE1O75459 146 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 SERPINI2O75830 405 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 CCDC166P0CW27 439 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 BMP6P22004 513 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 ATP5F1P24539 256 aaPredicted RBP13.39□□□□□ -0.27
SMG9-201ENST00000270066 HTR7P34969 479 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 SLC34A1Q06495 639 aa13.39□□□□□ -0.27
SMG9-201ENST00000270066 DET1Q7L5Y6 550 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms