RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 March4Q80TE3 409 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Epha10Q8BYG9 1007 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pgm5Q8BZF8 567 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Plac9Q8K262 108 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ttc8Q8VD72 515 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pex16Q91XC9 336 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 RhojQ9ER71 214 aa10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ehd1Q9WVK4 534 aaKnown RBP10.25□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r59E9PUT5 865 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lad1P57016 528 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Coq10bQ3THF9 240 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fam131bQ3TY60 332 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ampd1Q3V1D3 745 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rassf5Q5EBH1 413 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PostnQ62009 838 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Znf569Q80W31 679 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 B3glctQ8BHT6 489 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc18a2Q8BRU6 517 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Duoxa2Q9D311 320 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tmem114Q9D563 222 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cntd1Q9D995 334 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Leng1Q9DB98 261 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 H2afb2S4R1M3 115 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 TpteG5E8H5 664 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Spp1P10923 294 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lrpap1P55302 360 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tlr8P58682 1032 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mfhas1Q3V1N1 1048 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Papss1Q60967 624 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PrkciQ62074 595 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Plekha6Q7TQG1 1173 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Aste1Q8BIR2 672 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 R3hcc1lQ8BJM3 775 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Txndc11Q8K2W3 948 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rprd1aQ8VDS4 312 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Itm2cQ91VK4 269 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Snapc2Q91XA5 359 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gemin6Q9CX53 166 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ift27Q9D0P8 186 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q9D9D9 101 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 CtsmQ9JL96 333 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ern2Q9Z2E3 911 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PtprtQ99M80 1454 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dusp8O09112 663 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lsm3P62311 102 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Trpm4Q7TN37 1213 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Stk40Q7TNL3 435 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rtp1Q8C8C1 263 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc30a5Q8R4H9 761 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Azin1O35484 448 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fdft1P53798 416 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Csnk2bP67871 215 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slfn4Q3UV66 602 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Serpina12Q7TMF5 413 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nipal1Q8BMW7 416 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fubp1Q91WJ8 651 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Asah2Q9JHE3 756 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr1305A2AVW3 312 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm5930D3Z257 264 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 2610021A01RikE9Q0Q3 834 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 SprtnG3X912 497 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PklrP53657 574 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nrp1P97333 923 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Psg29Q3URN6 468 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Prom2Q3UUY6 835 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ssx9Q6XAS3 170 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Snx32Q80ZJ7 404 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rd3Q8BRE0 195 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Clptm1lQ8BXA5 539 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Aqp12Q8CHJ2 290 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr784Q8VFZ9 319 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Arpc2Q9CVB6 300 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cep72Q9D3R3 646 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mbd1Q9Z2E2 636 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm21319F6YNI8 144 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Glud1P26443 558 aaKnown RBP10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 ThrbP37242 461 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nudt2P56380 147 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Klhl5Q6PFE1 708 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Ssxb3Q6XAS4 170 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 NwcQ9CQI4 244 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dhx34Q9DBV3 1145 aa10.24□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cps1Q8C196 1500 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm15448F6PZL4 682 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Banf1O54962 89 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Copz1P61924 177 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dnajb14Q149L6 379 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Sh3rf1Q69ZI1 892 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r26Q6TAC4 855 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pcsk9Q80W65 694 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 AgpsQ8C0I1 645 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rpp40Q8R1F9 363 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rgs18Q99PG4 235 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q9CXL3 195 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Eef1akmt2Q9D853 244 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 1700003F12RikA2AKE5 210 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tubb1A2AQ07 451 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 JchainP01592 159 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Alas2P08680 587 aa10.23□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cdh3P10287 822 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms