RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 RPP25Q9BUL9 199 aaKnown RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 KLC2Q9H0B6 622 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SP110Q9HB58 689 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SLC24A3Q9HC58 644 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ABCB8Q9NUT2 735 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 GTSE1Q9NYZ3 720 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 DTLQ9NZJ0 730 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 MPP6Q9NZW5 540 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SLC25A13Q9UJS0 675 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 VPS28Q9UK41 221 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 PCDHB11Q9Y5F2 797 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 F5P12259 2224 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 PLXND1Q9Y4D7 1925 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 A0A1W2PQ67 120 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 KANSL1LA0AUZ9 987 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 BCLAF3A2AJT9 711 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CHURC1-FNTBB4DL54 471 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 RASA4BC9J798 803 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 PI4K2BG5E9Z4 385 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ENC1O14682 589 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 NDC80O14777 642 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ALOX15BO15296 676 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 RASA4O43374 803 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 DCXO43602 365 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 KDELR3O43731 214 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TSPAN3O60637 253 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 MAFKO60675 156 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 PRAMEF11O60813 436 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CNTN5O94779 1100 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 FGGP02679 453 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ARAFP10398 606 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 EPXP11678 715 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 POLR2EP19388 210 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CES1P23141 567 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ITGB7P26010 798 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 STIP1P31948 543 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CHRNA3P32297 505 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CSKP41240 450 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 GATA4P43694 442 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 RPS9P46781 194 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 SCTRP47872 440 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ST8SIA6P61647 398 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TUBB4BP68371 445 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 IFI35P80217 286 aaPredicted RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ZXDAP98168 799 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CCINQ13939 588 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 HNRNPDQ14103 355 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 LONRF2Q1L5Z9 754 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 FUT11Q495W5 492 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 SLC45A4Q5BKX6 768 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 RNF219Q5W0B1 726 aaPredicted RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 KAZNQ674X7 775 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 HEATR6Q6AI08 1181 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TPRG1Q6ZUI0 275 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TFAP2DQ7Z6R9 452 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CFAP52Q8N1V2 620 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 PCDH20Q8N6Y1 951 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 NPWQ8N729 165 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 MNS1Q8NEH6 495 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 SLC35B2Q8TB61 432 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CCHCR1Q8TD31 782 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TFB1MQ8WVM0 346 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 FAM3CQ92520 227 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 MAML1Q92585 1016 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 EDAQ92838 391 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 RTP4Q96DX8 246 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 MYEOVQ96EZ4 313 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ABHD17AQ96GS6 310 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 LRIG1Q96JA1 1093 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 QKIQ96PU8 341 aaKnown RBP eCLIP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 PDFQ9HBH1 243 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ATP13A1Q9HD20 1204 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 HEBP1Q9NRV9 189 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 KLHL11Q9NVR0 708 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ELOVL2Q9NXB9 296 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 IPO11Q9UI26 975 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 CDC23Q9UJX2 597 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 FBXL21Q9UKT6 434 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TRHDEQ9UKU6 1024 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 ANKRD36A6QL64 1941 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 NCOR1O75376 2440 aa6.85□□□□□ -1.31
UPF3B-205ENST00000636792 MYO18AQ92614 2054 aaKnown RBP6.85□□□□□ -1.31
UPF3B-205ENST00000636792 TARSL2A2RTX5 802 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 TBC1D3BA6NDS4 549 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 OTOL1A6NHN0 477 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 MATN3O15232 486 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 LIASO43766 372 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 NARSO43776 548 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ATP9BO43861 1147 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CEP104O60308 925 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ATG13O75143 517 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PHF2O75151 1096 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ZMPSTE24O75844 475 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ITGAVP06756 1048 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 RBP3P10745 1247 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 KRT10P13645 584 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms