RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 GGA2Q9UJY4 613 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 SNX24Q9Y343 169 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 PCDHGA2Q9Y5H1 932 aa8.19□□□□□ -1.1
PCDH9-205ENST00000614931 F5P12259 2224 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 A0A0A0MRY4 1105 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 TCRBV7S3A2A0A539 114 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 TTC24A2A3L6 582 aaPredicted RBP8.18□□□□□ -1.1
PCDH9-205ENST00000614931 C5orf60A6NFR6 353 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 CBX4O00257 560 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 MATN3O15232 486 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ZBTB24O43167 697 aaPredicted RBP8.18□□□□□ -1.1
PCDH9-205ENST00000614931 KDELR3O43731 214 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 TULP3O75386 442 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GCATO75600 419 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GJB3O75712 270 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 METTL18O95568 372 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GAS8O95995 478 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ADH1CP00326 375 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 MT-CO1P00395 513 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
PCDH9-205ENST00000614931 PSMB4P28070 264 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ECHS1P30084 290 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GJA4P35212 333 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 RGRP47804 291 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 CCR3P51677 355 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 TERF1P54274 439 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 VSNL1P62760 191 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GUCY2DQ02846 1103 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GAD2Q05329 585 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 KDSRQ06136 332 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF33AQ06730 810 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SLC10A7Q0GE19 358 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 CCINQ13939 588 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 IHHQ14623 411 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 PON2Q15165 354 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 CYTH1Q15438 398 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GLE1Q53GS7 698 aaKnown RBP8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ANKRD20A2Q5SQ80 823 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ANKRD20A1Q5TYW2 823 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ANKRD20A3Q5VUR7 823 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ANKRD22Q5VYY1 191 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 IL31Q6EBC2 164 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ZDHHC24Q6UX98 284 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF783Q6ZMS7 281 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GSTA5Q7RTV2 222 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ADIPOR2Q86V24 386 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF354CQ86Y25 554 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 CPA6Q8N4T0 437 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 TEX26Q8N6G2 289 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SUMF1Q8NBK3 374 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SEC14L1Q92503 715 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 UBXN4Q92575 508 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 FATE1Q969F0 183 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SPATA13Q96N96 652 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ERP44Q9BS26 406 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 BRD8Q9H0E9 1235 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SP110Q9HB58 689 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 GDF3Q9NR23 364 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 DNAJC17Q9NVM6 304 aaKnown RBP8.18□□□□□ -1.1
PCDH9-205ENST00000614931 KIAA1522Q9P206 1035 aaPredicted RBP8.18□□□□□ -1.1
PCDH9-205ENST00000614931 LHX3Q9UBR4 397 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 ASIC3Q9UHC3 531 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 VPS28Q9UK41 221 aa8.18□□□□□ -1.1
PCDH9-205ENST00000614931 SCN8AQ9UQD0 1980 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 USP34Q70CQ2 3546 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 PRRT4C9JH25 899 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 K7ERQ8 282 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 DNALI1O14645 258 aaPredicted RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 SMAD6O43541 496 aaKnown RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF821O75541 412 aaPredicted RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 TMCC1O94876 653 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 TMEM63AO94886 807 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 PAPSS2O95340 614 aaPredicted RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 MMP2P08253 660 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 CHRM1P11229 460 aaPredicted RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 CCNB1P14635 433 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 NFKB1P19838 968 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 STIP1P31948 543 aaKnown RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 ETFBP38117 255 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 CXCL12P48061 93 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 CARSP49589 748 aaKnown RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 DGKGP49619 791 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 STK19P49842 368 aaPredicted RBP8.17□□□□□ -1.1
PCDH9-205ENST00000614931 OXCT1P55809 520 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 MAXP61244 160 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 SATB1Q01826 763 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 LMNB2Q03252 620 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 GPS1Q13098 491 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 OLIG2Q13516 323 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 KCNJ11Q14654 390 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 P3H1Q32P28 736 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 TEX44Q53QW1 395 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 TMEM196Q5HYL7 178 aa8.17□□□□□ -1.1
PCDH9-205ENST00000614931 SYCP2LQ5T4T6 812 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms