RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RNF34Q969K3 372 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 PSMB7Q99436 277 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 SLC4A5Q9BY07 1137 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 SLC17A9Q9BYT1 436 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 THAP9Q9H5L6 903 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-210ENST00000590541 DYRK4Q9NR20 520 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.71■□□□□ 0.43
RETREG3-210ENST00000590541 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-210ENST00000590541 UBR5O95071 2799 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-210ENST00000590541 PTPN13Q12923 2485 aa17.71■□□□□ 0.42
RETREG3-210ENST00000590541 BSNQ9UPA5 3926 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 CCDC187A0A096LP49 1063 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 E5RJQ4 531 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 RIOK3O14730 519 aaKnown RBP17.7■□□□□ 0.42
RETREG3-210ENST00000590541 MUSKO15146 869 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 SMAD6O43541 496 aaKnown RBP17.7■□□□□ 0.42
RETREG3-210ENST00000590541 SNAP91O60641 907 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 PAK4O96013 591 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-210ENST00000590541 ITGB6P18564 788 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
RETREG3-210ENST00000590541 AUHQ13825 339 aaKnown RBP17.7■□□□□ 0.42
RETREG3-210ENST00000590541 NR0B2Q15466 257 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 TAF5Q15542 800 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 TRIM65Q6PJ69 517 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 CREBRFQ8IUR6 639 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 LMX1AQ8TE12 382 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 STK32AQ8WU08 396 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 KREMEN1Q96MU8 473 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 BOCQ9BWV1 1114 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 HDAC8Q9BY41 377 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 NUP62CLQ9H1M0 184 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 VANGL2Q9ULK5 521 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 TBC1D30Q9Y2I9 924 aa17.7■□□□□ 0.42
RETREG3-210ENST00000590541 TPP1O14773 563 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 SPINT1O43278 529 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 NOBOXO60393 691 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 PRNPP04156 253 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 SLC2A3P11169 496 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 KRT5P13647 590 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 JUNDP17535 347 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 RRM1P23921 792 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 CCR1P32246 355 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 GGCXP38435 758 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 MTIF2P46199 727 aaKnown RBP17.69■□□□□ 0.42
RETREG3-210ENST00000590541 EIF2B5Q13144 721 aaKnown RBP17.69■□□□□ 0.42
RETREG3-210ENST00000590541 SRSF6Q13247 344 aaKnown RBP17.69■□□□□ 0.42
RETREG3-210ENST00000590541 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-210ENST00000590541 PDE1CQ14123 709 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-210ENST00000590541 EXOC3L4Q17RC7 722 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 ARSIQ5FYB1 569 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 XKR5Q6UX68 686 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 ATG14Q6ZNE5 492 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 C14orf80Q86SX3 495 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 TMEM110Q86TL2 294 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 EXTL1Q92935 676 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 CCDC114Q96M63 670 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 APEX2Q9UBZ4 518 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 HS3ST4Q9Y661 456 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 BOD1L1Q8NFC6 3051 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 RP1P56715 2156 aa17.69■□□□□ 0.42
RETREG3-210ENST00000590541 COL12A1Q99715 3063 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 SYNJ2BP-COX16A0A087WUM0 186 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 SUV39H1O43463 412 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 CLDN11O75508 207 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 RABIFP47224 123 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 RPS21P63220 83 aaKnown RBP17.68■□□□□ 0.42
RETREG3-210ENST00000590541 TGIF1Q15583 401 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 C5orf22Q49AR2 442 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 KIAA1161Q6NSJ0 714 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 IRF2BP1Q8IU81 584 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 SLC35F3Q8IY50 421 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 GRIN3AQ8TCU5 1115 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 SGF29Q96ES7 293 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 MED15Q96RN5 788 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 KLF6Q99612 283 aaPredicted RBP17.68■□□□□ 0.42
RETREG3-210ENST00000590541 IL12RB2Q99665 862 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 CCDC3Q9BQI4 270 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 MUC3BQ9H195 1237 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 FAM204AQ9H8W3 233 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 COX16Q9P0S2 106 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 IL36AQ9UHA7 158 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 VPS51Q9UID3 782 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 PCDHGA7Q9Y5G6 932 aa17.68■□□□□ 0.42
RETREG3-210ENST00000590541 TRPM6Q9BX84 2022 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 NTN3O00634 580 aaPredicted RBP17.67■□□□□ 0.42
RETREG3-210ENST00000590541 GCATO75600 419 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 LEFTY1O75610 366 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 CNTN5O94779 1100 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 GJB6O95452 261 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 ITGB2P05107 769 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 SLC5A2P31639 672 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 NEK3P51956 506 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 CDH4P55283 916 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 KRT83P78385 493 aa17.67■□□□□ 0.42
RETREG3-210ENST00000590541 CDK17Q00537 523 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms