RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ATP11CQ8NB49 1132 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 FGF11Q92914 225 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 FAM81BQ96LP2 452 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 CPXM1Q96SM3 734 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 LGMNQ99538 433 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 FEM1AQ9BSK4 669 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 CRACR2AQ9BSW2 395 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 SIK2Q9H0K1 926 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 FZD3Q9NPG1 666 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 SAMSN1Q9NSI8 373 aaKnown RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 ARHGAP20Q9P2F6 1191 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 PPM1HQ9ULR3 514 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 HS3ST4Q9Y661 456 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 CELSR3Q9NYQ7 3312 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 LAMA5O15230 3695 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 ITPR1Q14643 2758 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 A0A1W2PQU0 124 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 M0QYT0 321 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 TRIM38O00635 465 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 CLDN11O75508 207 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 PCDH8O95206 1070 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 MT-CO3P00414 261 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 GLI1P08151 1106 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 ACP1P24666 158 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 IRAK1P51617 712 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 CDH4P55283 916 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 SNX16P57768 344 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 CXADRP78310 365 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 E2F1Q01094 437 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 ZNF211Q13398 564 aaPredicted RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 RTP5Q14D33 572 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 BRD3Q15059 726 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 GJB7Q6PEY0 223 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 FAM183BPQ6ZVS7 135 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 GPR155Q7Z3F1 870 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 PTAR1Q7Z6K3 402 aaPredicted RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 SH2D3CQ8N5H7 860 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 C1orf131Q8NDD1 294 aaKnown RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 OR52K2Q8NGK3 314 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 GRIN3AQ8TCU5 1115 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 NAF1Q96HR8 494 aaKnown RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 PPP1R16AQ96I34 528 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 SLC2A13Q96QE2 648 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 C2orf49Q9BVC5 232 aaPredicted RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 ABCG4Q9H172 646 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 PRM3Q9NNZ6 103 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 EVA1BQ9NVM1 165 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 ASNSD1Q9NWL6 643 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 PRDM4Q9UKN5 801 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 CNTN6Q9UQ52 1028 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 RAI2Q9Y5P3 530 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 V9GYY5 206 aaPredicted RBP9.04□□□□□ -0.96
TDP1-208ENST00000553989 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
TDP1-208ENST00000553989 KNTC1P50748 2209 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 ATXN7O15265 892 aaPredicted RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 SNAP91O60641 907 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 PAGE1O75459 146 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 DAB1O75553 588 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 ENDOD1O94919 500 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 PRNPP04156 253 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 SRCP12931 536 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 HNRNPA2B1P22626 353 aaKnown RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 DGKAP23743 735 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 RRM1P23921 792 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 EEF1GP26641 437 aaKnown RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 CHRNA3P32297 505 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 KRT9P35527 623 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 SULT1E1P49888 294 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 ADKP55263 362 aaKnown RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 PCBP4P57723 403 aaKnown RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 CLDN2P57739 230 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 RNASE9P60153 205 aaKnown RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 PTK2Q05397 1052 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 KCNMA1Q12791 1236 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 GPS2Q13227 327 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 TBC1D25Q3MII6 688 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 TAF1BQ53T94 588 aaPredicted RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 PIP5KL1Q5T9C9 394 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 BROXQ5VW32 411 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 FBXO38Q6PIJ6 1188 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 LRRC31Q6UY01 552 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 LINGO4Q6UY18 593 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 APTXQ7Z2E3 356 aaKnown RBP9.03□□□□□ -0.96
TDP1-208ENST00000553989 KANSL1Q7Z3B3 1105 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 TFAP2DQ7Z6R9 452 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 HORMAD1Q86X24 394 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 FAM114A1Q8IWE2 563 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 DCBLD1Q8N8Z6 715 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 OR4C6Q8NH72 309 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 FAM131CQ96AQ9 280 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 DEPDC7Q96QD5 511 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 CARD6Q9BX69 1037 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms