RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 PCDHB18PQ96TA0 734 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 CNPY3Q9BT09 278 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 SPON2Q9BUD6 331 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 HDAC8Q9BY41 377 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 EDEM3Q9BZQ6 932 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 EBF2Q9HAK2 575 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 GDF3Q9NR23 364 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 TMPRSS4Q9NRS4 437 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
SSR3-205ENST00000467789 ARHGAP20Q9P2F6 1191 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 HPCAL4Q9UM19 191 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 SNX10Q9Y5X0 201 aa10.58□□□□□ -0.72
SSR3-205ENST00000467789 COL5A1P20908 1838 aaPredicted RBP10.58□□□□□ -0.72
SSR3-205ENST00000467789 TCRBV5S1A1TA0A578 114 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 EIF3CLB5ME19 914 aaKnown RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 PRAMEF26H0Y7S4 382 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 H0Y8X5 98 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 TLR4O00206 839 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 KPNA3O00505 521 aaPredicted RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 SMAD6O43541 496 aaKnown RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 TNFSF14O43557 240 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 HYAL3O43820 417 aaPredicted RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 BNIP3LO60238 219 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 LRIG2O94898 1065 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 PLEKP08567 350 aaPredicted RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 CDK4P11802 303 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 ATP1A3P13637 1013 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 L1CAMP32004 1257 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 NUMBP49757 651 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 ZNF165P49910 485 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 PPP2CBP62714 309 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 PPP2CAP67775 309 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 STAT4Q14765 748 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 CARD16Q5EG05 197 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 EFHC2Q5JST6 749 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 RWDD4Q6NW29 188 aaKnown RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 DNAJC24Q6P3W2 148 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 DCUN1D2Q6PH85 259 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 ERN2Q76MJ5 926 aaKnown RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 IRF2BP2Q7Z5L9 587 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 NLRP14Q86W24 1093 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 DRC7Q8IY82 874 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 MCOLN2Q8IZK6 566 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 KDF1Q8NAX2 398 aaPredicted RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 OR7D4Q8NG98 312 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 CASKIN2Q8WXE0 1202 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 GATA6Q92908 595 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 EIF3CQ99613 913 aaKnown RBP10.57□□□□□ -0.72
SSR3-205ENST00000467789 IL36AQ9UHA7 158 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 AKAP13Q12802 2813 aa10.57□□□□□ -0.72
SSR3-205ENST00000467789 K7ERQ8 282 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 RAMP2O60895 175 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 ZNF821O75541 412 aaPredicted RBP10.56□□□□□ -0.72
SSR3-205ENST00000467789 DKK1O94907 266 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 WNT1P04628 370 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 CTSLP07711 333 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 GZMAP12544 262 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 TNFAIP3P21580 790 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 ITGB7P26010 798 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 RXRGP48443 463 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 NEK3P51956 506 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 METAP1P53582 386 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 NXPH1P58417 271 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
SSR3-205ENST00000467789 TAS2R38P59533 333 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 ARF5P84085 180 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 POLD3Q15054 466 aaPredicted RBP10.56□□□□□ -0.72
SSR3-205ENST00000467789 PIP5KL1Q5T9C9 394 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 CAVIN1Q6NZI2 390 aaKnown RBP10.56□□□□□ -0.72
SSR3-205ENST00000467789 LINGO4Q6UY18 593 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 DPY19L3Q6ZPD9 716 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 HORMAD1Q86X24 394 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 CHCHD4Q8N4Q1 142 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 BAP1Q92560 729 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 ARHGEF2Q92974 986 aaKnown RBP10.56□□□□□ -0.72
SSR3-205ENST00000467789 RAB7BQ96AH8 199 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 NCAPGQ9BPX3 1015 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 HEPHQ9BQS7 1158 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 SYT11Q9BT88 431 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 CATSPERBQ9H7T0 1116 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 PARVAQ9NVD7 372 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 AIPL1Q9NZN9 384 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 NEU3Q9UQ49 428 aa10.56□□□□□ -0.72
SSR3-205ENST00000467789 A0A1B0GTH6 734 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 FAM170AA1A519 330 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 WASH4PA8MWX3 477 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 C1QTNF9BB2RNN3 333 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 FAM72CH0Y354 149 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 FGF10O15520 208 aaPredicted RBP10.55□□□□□ -0.72
SSR3-205ENST00000467789 TEX33O43247 280 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 CCP110O43303 1012 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 AP1G1O43747 822 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 LEFTY1O75610 366 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 TOP3BO95985 862 aaKnown RBP10.55□□□□□ -0.72
SSR3-205ENST00000467789 GSRP00390 522 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 C1QTNF9P0C862 333 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 SPINK2P20155 84 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 PTMSP20962 102 aa10.55□□□□□ -0.72
SSR3-205ENST00000467789 HNRNPA2B1P22626 353 aaKnown RBP10.55□□□□□ -0.72
SSR3-205ENST00000467789 GLDCP23378 1020 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms