RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ASPMQ8IZT6 3477 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 PLXNA2O75051 1894 aa19.22■□□□□ 0.67
SF3A1-205ENST00000463818 CXorf51AA0A1B0GTR3 108 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 MBD3O95983 291 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 L1CAMP32004 1257 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 CCNHP51946 323 aaPredicted RBP19.21■□□□□ 0.67
SF3A1-205ENST00000463818 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
SF3A1-205ENST00000463818 DNAJC3Q13217 504 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 SMAD1Q15797 465 aaKnown RBP19.21■□□□□ 0.67
SF3A1-205ENST00000463818 MON1BQ7L1V2 547 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 SLFN11Q7Z7L1 901 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 PLPP6Q8IY26 295 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 AOPEPQ8N6M6 819 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 ISG20Q96AZ6 181 aaKnown RBP19.21■□□□□ 0.67
SF3A1-205ENST00000463818 HPCAL4Q9UM19 191 aa19.21■□□□□ 0.67
SF3A1-205ENST00000463818 TMEM131Q92545 1883 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 TCRBV5S1A1TA0A578 114 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 FAM149AA5PLN7 773 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 RAMP2O60895 175 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 THEGLP0DJG4 465 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 ITGB7P26010 798 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 AKT2P31751 481 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 NEK3P51956 506 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 ZNF143P52747 638 aaPredicted RBP19.2■□□□□ 0.66
SF3A1-205ENST00000463818 TYRO3Q06418 890 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 POLD3Q15054 466 aaPredicted RBP19.2■□□□□ 0.66
SF3A1-205ENST00000463818 SEL1L3Q68CR1 1132 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 ACAD10Q6JQN1 1059 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 DNAJC24Q6P3W2 148 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 SCYL2Q6P3W7 929 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 FBXL19Q6PCT2 694 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 LEKR1Q6ZMV7 388 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 KANSL1Q7Z3B3 1105 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 PYROXD2Q8N2H3 581 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 RYBPQ8N488 228 aaPredicted RBP19.2■□□□□ 0.66
SF3A1-205ENST00000463818 MDM1Q8TC05 714 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 FEM1CQ96JP0 617 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 TM6SF2Q9BZW4 377 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 ZDHHC6Q9H6R6 413 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 FZD3Q9NPG1 666 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 NEU3Q9UQ49 428 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 PCDHGA1Q9Y5H4 931 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 ZFHX4Q86UP3 3567 aa19.2■□□□□ 0.66
SF3A1-205ENST00000463818 CHD6Q8TD26 2715 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 TRABD2BA6NFA1 517 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 TEX33O43247 280 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 CCP110O43303 1012 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 SDC3O75056 442 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 C1SP09871 688 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 CCDC172P0C7W6 258 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 ADRB3P13945 408 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 FERP16591 822 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 HNRNPA2B1P22626 353 aaKnown RBP19.19■□□□□ 0.66
SF3A1-205ENST00000463818 GKP32189 559 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 GEMIN4P57678 1058 aaKnown RBP19.19■□□□□ 0.66
SF3A1-205ENST00000463818 CLDN2P57739 230 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 RPL7AP62424 266 aaKnown RBP19.19■□□□□ 0.66
SF3A1-205ENST00000463818 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
SF3A1-205ENST00000463818 TMEM259Q4ZIN3 620 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 SFMBT2Q5VUG0 894 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 IRF2BP2Q7Z5L9 587 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 MCOLN2Q8IZK6 566 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 OR13H1Q8NG92 308 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 TSC1Q92574 1164 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 SLC17A9Q9BYT1 436 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 KLHL11Q9NVR0 708 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 FADS3Q9Y5Q0 445 aa19.19■□□□□ 0.66
SF3A1-205ENST00000463818 ANKRD62A6NC57 917 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 KDELR3O43731 214 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 PAK4O96013 591 aaPredicted RBP19.18■□□□□ 0.66
SF3A1-205ENST00000463818 TNFAIP3P21580 790 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 RPS21P63220 83 aaKnown RBP19.18■□□□□ 0.66
SF3A1-205ENST00000463818 CAMK2BQ13554 666 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 MYLK3Q32MK0 819 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 EFHC2Q5JST6 749 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 PARS2Q7L3T8 475 aaKnown RBP19.18■□□□□ 0.66
SF3A1-205ENST00000463818 TMPRSS12Q86WS5 348 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 OR6K2Q8NGY2 324 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 MCEEQ96PE7 176 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 NAT10Q9H0A0 1025 aaKnown RBP19.18■□□□□ 0.66
SF3A1-205ENST00000463818 TMEM63CQ9P1W3 806 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 HS3ST3A1Q9Y663 406 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 CFAP47Q6ZTR5 3102 aa19.18■□□□□ 0.66
SF3A1-205ENST00000463818 C16orf96A6NNT2 1141 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 BUB1O43683 1085 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 AP1G1O43747 822 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 RFPL3O75679 317 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 POP4O95707 220 aaKnown RBP19.17■□□□□ 0.66
SF3A1-205ENST00000463818 GSRP00390 522 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 CDK4P11802 303 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 JUPP14923 745 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 EPHB2P29323 1055 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 ACADVLP49748 655 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 SNRPD1P62314 119 aaKnown RBP19.17■□□□□ 0.66
SF3A1-205ENST00000463818 FGL2Q14314 439 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 ANO6Q4KMQ2 910 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 PPP1R15BQ5SWA1 713 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 KIAA1161Q6NSJ0 714 aa19.17■□□□□ 0.66
SF3A1-205ENST00000463818 DCUN1D2Q6PH85 259 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms