RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TMA16Q96EY4 203 aaKnown RBP18.27■□□□□ 0.51
SCARB1-203ENST00000415380 RNF39Q9H2S5 420 aa18.27■□□□□ 0.51
SCARB1-203ENST00000415380 ZNF696Q9H7X3 374 aa18.27■□□□□ 0.51
SCARB1-203ENST00000415380 NSMCE4AQ9NXX6 385 aa18.27■□□□□ 0.51
SCARB1-203ENST00000415380 PTTG2Q9NZH5 202 aa18.27■□□□□ 0.51
SCARB1-203ENST00000415380 SNX10Q9Y5X0 201 aa18.27■□□□□ 0.51
SCARB1-203ENST00000415380 MYOCOSA0A1B0GUC4 107 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 TCAF2A6NFQ2 919 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 TMEM233B4DJY2 109 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 MTSS1O43312 755 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 ATP6V1B1P15313 513 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 PTPN1P18031 435 aaKnown RBP18.26■□□□□ 0.51
SCARB1-203ENST00000415380 TCN1P20061 433 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-203ENST00000415380 WARSP23381 471 aaKnown RBP18.26■□□□□ 0.51
SCARB1-203ENST00000415380 IREB2P48200 963 aaKnown RBP18.26■□□□□ 0.51
SCARB1-203ENST00000415380 HCAR3P49019 387 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 AIF1P55008 147 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 GALNT2Q10471 571 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 RFTN1Q14699 578 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-203ENST00000415380 IYDQ6PHW0 289 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 MOB2Q70IA6 237 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 CNTD1Q8N815 330 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 FAM156AQ8NDB6 213 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 PPP1R13LQ8WUF5 828 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 TEKT5Q96M29 485 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 MED10Q9BTT4 135 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 KIFC1Q9BW19 673 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 ULBP1Q9BZM6 244 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 GRIP2Q9C0E4 1043 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 BRD8Q9H0E9 1235 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 PLK2Q9NYY3 685 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 FBXW11Q9UKB1 542 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 NRCAMQ92823 1304 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 YJEFN3A6XGL0 299 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 VAPBO95292 243 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 JCHAINP01591 159 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 CAPNS1P04632 268 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 CCNA1P78396 465 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 KLHDC10Q6PID8 442 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 SPATA6LQ8N4H0 392 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 CCNYL1Q8N7R7 359 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 HIC2Q96JB3 615 aa18.26■□□□□ 0.51
SCARB1-203ENST00000415380 ZFRQ96KR1 1074 aaKnown RBP18.26■□□□□ 0.51
SCARB1-203ENST00000415380 ASLP04424 464 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 LILRA4P59901 499 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 INTS6LQ5JSJ4 861 aaKnown RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 TSTD2Q5T7W7 516 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 LCA5Q86VQ0 697 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 TMEM102Q8N9M5 508 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 KDM1BQ8NB78 822 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 NXNL1Q96CM4 212 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 PRPF18Q99633 342 aaKnown RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 OMDQ99983 421 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 UNKQ9C0B0 810 aaKnown RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 ACOT9Q9Y305 439 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 RBM47A0AV96 593 aaKnown RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 RNASEH2AO75792 299 aaKnown RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 PGK1P00558 417 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 NAPEPLDQ6IQ20 393 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 OTOP3Q7RTS5 596 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 CEP97Q8IW35 865 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 DENND6AQ8IWF6 608 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 GPR78Q96P69 363 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 RBM38Q9H0Z9 239 aaKnown RBP18.25■□□□□ 0.51
SCARB1-203ENST00000415380 ATXN10Q9UBB4 475 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 KCNH4Q9UQ05 1017 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 PCNTO95613 3336 aa18.25■□□□□ 0.51
SCARB1-203ENST00000415380 CAPN15O75808 1086 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 FAM58BPP0C7Q3 252 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 COL6A2P12110 1019 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 MPP1Q00013 466 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 MYLK3Q32MK0 819 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 PABPC1LQ4VXU2 614 aaKnown RBP18.24■□□□□ 0.51
SCARB1-203ENST00000415380 KIAA0319Q5VV43 1072 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 B3GNT6Q6ZMB0 384 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
SCARB1-203ENST00000415380 MFSD6LQ8IWD5 586 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 GPC2Q8N158 579 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 ZSCAN18Q8TBC5 510 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-203ENST00000415380 RNF217Q8TC41 542 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 VAT1Q99536 393 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 SUDS3Q9H7L9 328 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-203ENST00000415380 DDIT4Q9NX09 232 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 PDCD11Q14690 1871 aaKnown RBP18.24■□□□□ 0.51
SCARB1-203ENST00000415380 CCDC160A6NGH7 325 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 HSPA13P48723 471 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 DAOAP59103 153 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 CTBP1Q13363 440 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 PTK2BQ14289 1009 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 PRPSAP1Q14558 356 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 TOP6BLQ8N6T0 577 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 DRAXINQ8NBI3 349 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-203ENST00000415380 ZFP28Q8NHY6 868 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 USP33Q8TEY7 942 aa18.24■□□□□ 0.51
SCARB1-203ENST00000415380 PDLIM1O00151 329 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 TRIM38O00635 465 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 SDHDO14521 159 aa18.23■□□□□ 0.51
SCARB1-203ENST00000415380 MMP3P08254 477 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms