RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PCDHB18PQ96TA0 734 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 NPY6RQ99463 290 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 TKTL2Q9H0I9 626 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 SIK2Q9H0K1 926 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 RSPH9Q9H1X1 276 aaPredicted RBP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 IL21RQ9HBE5 538 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 EIF2B4Q9UI10 523 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 N6AMT1Q9Y5N5 214 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 KNL1Q8NG31 2342 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 CCDC151A5D8V7 595 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 A6NNZ2 444 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 MID1O15344 667 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 SMNDC1O75940 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ZNF18P17022 549 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 SPINK2P20155 84 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 MCM3P25205 808 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 PMLP29590 882 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 OXTRP30559 389 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ABL2P42684 1182 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 CXCR3P49682 368 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 BPIFB4P59827 614 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ECT2LQ008S8 904 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 MYL5Q02045 173 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 GFPT1Q06210 699 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ZNF252P-AS1Q0IIN9 211 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 MYBPC3Q14896 1274 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 SNCBQ16143 134 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 STX1AQ16623 288 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 THEMIS2Q5TEJ8 643 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 DAB2IPQ5VWQ8 1189 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ERICH1Q86X53 443 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 MMAAQ8IVH4 418 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 CADM4Q8NFZ8 388 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 CEP76Q8TAP6 659 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 SNX19Q92543 992 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 PTPRN2Q92932 1015 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 FOXJ1Q92949 421 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ALG14Q96F25 216 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 CFAP57Q96MR6 1250 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 FAM129BQ96TA1 746 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ORAI3Q9BRQ5 295 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 NUP58Q9BVL2 599 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 ARHGEF38Q9NXL2 777 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 KIAA1522Q9P206 1035 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 LIMA1Q9UHB6 759 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 TMEM59LQ9UK28 342 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 TMED5Q9Y3A6 229 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
NIF3L1-202ENST00000409020 A0A1B0GVM2 712 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 A0A1W2PP55 124 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 TCAF2A6NFQ2 919 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 METTL12A8MUP2 240 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 H3BQF6 201 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 RNF103O00237 685 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 PLK4O00444 970 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 DNTTP04053 509 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 CD59P13987 128 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 SOX5P35711 763 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 PSMD8P48556 350 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 NEK2P51955 445 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 ST8SIA6P61647 398 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 TYRO3Q06418 890 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 WDR45BQ5MNZ6 344 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 RABGAP1LQ5R372 815 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 SYCP2LQ5T4T6 812 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 HDXQ7Z353 690 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 BNIPLQ7Z465 357 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 PIP4P1Q86T03 277 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 STK40Q8N2I9 435 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 AADATQ8N5Z0 425 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 AOPEPQ8N6M6 819 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 BIRC7Q96CA5 298 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 SH3GL1Q99961 368 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 ZWILCHQ9H900 591 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 EBF2Q9HAK2 575 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 METTL5Q9NRN9 209 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 DNAI1Q9UI46 699 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 OR51B4Q9Y5P0 310 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 CACNA1BQ00975 2339 aa9.9□□□□□ -0.82
NIF3L1-202ENST00000409020 ITIH6Q6UXX5 1313 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 FAM47DPA6NHR8 397 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 LGALS16A8MUM7 142 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SNAP91O60641 907 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SHOX2O60902 331 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 GJB3O75712 270 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 RASSF9O75901 435 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SEMA4FO95754 770 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 LSM8O95777 96 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 MT-CO1P00395 513 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ASLP04424 464 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 CYP1A1P04798 512 aaPredicted RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms